Myxococcus sp. MxC21-1: QEG98_24905
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Entry
QEG98_24905 CDS
T09754
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
myx
Myxococcus sp. MxC21-1
Pathway
myx00521
Streptomycin biosynthesis
myx00523
Polyketide sugar unit biosynthesis
myx00541
O-Antigen nucleotide sugar biosynthesis
myx01100
Metabolic pathways
myx01110
Biosynthesis of secondary metabolites
myx01250
Biosynthesis of nucleotide sugars
Module
myx_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
myx00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
QEG98_24905 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
QEG98_24905 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
QEG98_24905 (rfbC)
Enzymes [BR:
myx01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
QEG98_24905 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WNZ59317
UniProt:
A0AA96XDC3
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All DBs
Position
complement(5585523..5586074)
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AA seq
183 aa
AA seq
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MKVTPLEIPDVLLLEPKVFGDDRGFFMEMFHAARYAAVGIPGPFVQDNYSRSAKGTLRGL
HFQEPQAQGKLVQVLAGAVYDVAVDVRRGSPTFGQWVAVELSSDNRRQLWVPSGFAHGFC
VVSDSADFHYKCTALYAPETERSVVWNDPDLAIPWPVSEPRLSPKDAQAPRLRDAPLLPE
YVG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggtgacgccgctggagattccggatgtgctgctgctggagcccaaggtcttcggt
gatgaccgcggcttcttcatggagatgttccatgcggcgcggtacgcggccgtgggcatc
cccgggcccttcgtgcaggacaactactcgcgctcggcgaaggggacgctgcggggcctg
cacttccaggagccgcaggcccaggggaagctggtgcaggtgttggcgggcgccgtgtac
gacgtcgcggtggacgtgcggcgcggctcgcccaccttcggccagtgggtggcggtggag
ttgtcctcggacaaccgccgtcagctttgggttccgtcgggtttcgcccacggcttctgc
gtggtgagtgactccgcggacttccactacaagtgcaccgcgctctacgcgccggagacg
gagcggagcgtcgtttggaatgacccggacctggcgattccctggccggtgagcgagccg
cggttgtcgcccaaggatgcccaggccccgagactccgcgacgcgcccttgcttccggag
tacgtgggctga
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