Maylandia zebra (zebra mbuna): 101469016
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Entry
101469016 CDS
T02814
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X2
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mze04131
]
101469016
Membrane trafficking [BR:
mze04131
]
Protein recycling
Others
Others
101469016
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
PSII_BNR
SHOCT
Motif
Other DBs
NCBI-GeneID:
101469016
NCBI-ProteinID:
XP_014267451
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Position
LG6:36581051..36777703
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AA seq
1242 aa
AA seq
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MNGEVIFCPKWHRAFWFLLFAVPCFLHAGEAEITCRSCQPGSKWLGQELLLKFHTSESAT
GFRGQVFGNSERRFGAASAETPRLSCAAGSAECARARVEYPETSLKRNTRDLRAKGELGQ
SEFTQMKVSNVSASGQKKNGRVEGVRRRARRNSHGDKVGSSRSAQNQDRGEATGTVAGRR
VARSELRWSGEERRAAGPRQEELKLNSSTFALTGDSSHNQAMVHWSGQNSSVILMLTKLF
DFNLNSVTESSLWRSTDYGATYQKLNDKVGAKTILSYLYVSPNNKRKIMLLTDPEIESSL
LISSDEGATYQKYRLNFYILSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAP
NRFYWSKMGLDKEPGLIHLETSITEGQALYVTCKLQNCTDANKGKPFPGYIDPNSLVVQD
EYVFVQVSTGGRPIYYVSAKRDVFTPMKLPKYTLPKDLHVISTDENRVVAAVREWNQNET
YNLYVSDTSGVYYTLALENVVSSMGPEGNVMVDLYEVAGIKGMFLANKRTDNQVKTYITY
NRGRDWKLLQAPSKDLRGNSIHCVLPYCSLHLHLHVSANPYTSGNIASRDSAPGIIVASG
SIGAELTTSNVSVFITSDAGNTWRQIFDEEYAVLYLDQGGALVAIRHTPLPIRHLWLSFD
EGRQWNKYSFTNTPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCIE
ADYQTWHLHNQGEPCLMGVKRIYRKLKPTSRCVMGKTYSVTMTSAPCDCTEADFECDYGF
ERRTDGKCTPAFWFHPSSMSRSCTTGMTFLNSTGYRKVVSNTCTAGVSAEYTARRQHCPI
QAPKGLHLVTSEGSLTAVLGTNVTFLVFLEEGDGARTSITLDFGDGHALTYSNVSSIEEG
IKHIYKAVGIYRVTATGENSLGSETAMLYLHVTCQLEYIHLSAPFVAVRNKEVNLTAVLW
PGQVGTVTYIWWIGNNTEPVITLEGSVAYTFSREGINTVTVQVSAGNTILQDRKTIAVHE
YFRSHLLAFSSNLDEHNPDIAEWRLDVSRVIKNSLIQATGVREDQLLVTVLPGLPTAAEF
FLLPDKQITEGKPEKSSAHLDQLSELLLSALNQNLVQFTLRPGVQVTVYAAHLSAAPLVD
TSENHSGSAMLMLLSVVVVGLAVFVIYKFKRKIPGLNVYAQMQNEKEQEMSPANPTVATP
SSQQDLVHSLEILDTEFNSRPIGCMKPHVHVKFSTELPTYIV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgaacggggaggtcatattttgcccaaagtggcaccgcgcgttttggtttctgcttttc
gcggtgccctgcttccttcacgccggcgaggctgagataacttgccgctcatgccagcct
ggaagtaagtggctcggacaggaattactgctgaaatttcacacgagcgagtccgcaaca
gggttcaggggacaagtttttgggaacagtgagcggagattcggggccgcgagtgcggaa
actccgcggctcagttgcgcagctgggtccgctgaatgcgctcgagctcgggtggaatac
ccggagacgagcctcaaacggaatacacgagatctgcgcgcaaaaggcgaactcggccag
agcgagtttacgcagatgaaagtttccaacgtgtcggcgagtggccagaagaagaacggc
cgtgtcgaaggtgtgaggaggcgcgccaggaggaacagccacggggacaaagtcggatcc
tcccgttcggcccagaatcaggatcggggagaggccacgggcacggtggctgggcgcaga
gtggcgcgctctgaattgcgctggagcggagaggagcggagagccgccggtccgagacag
gaggagctaaaacttaacagttcgacgttcgctttgaccggagattcgtctcacaaccag
gctatggtgcactggtccgggcagaacagcagcgtgattctgatgctgaccaaactattt
gacttcaacctcaacagcgtgaccgagagttcattatggaggtcaacagactacggagca
acgtaccagaagctgaatgacaaagtaggagcaaagacaatactcagttatttgtacgtg
agccccaacaacaagagaaagatcatgctgctaaccgatccggagatagagagcagcctt
ctgatcagctctgatgaaggagccacctaccagaagtaccggctgaatttctacatcctc
agccttctcttccaccctgagcaggaggactggattctcgcctacagccatgaccagaag
ctctacagctcggtggagtttggacggaggtggcagctggtgcacgagcgagtggctccc
aatcgtttctactggtcgaaaatgggtttggacaaagagccgggcttaattcacctggaa
accagcatcactgaaggacaggcgctgtatgtcacctgcaagctgcagaactgcaccgac
gccaataagggcaaaccattccccggctacattgaccccaattctctggtggtgcaagat
gagtatgtgtttgtccaggtgtcaactggggggaggccaatctactacgtgtcagctaaa
agagatgtcttcacccctatgaagctgcccaagtatacgctgcccaaggatctgcatgtg
atcagtacggatgaaaaccgtgtcgtcgcggctgtgagggagtggaaccagaatgaaacc
tacaacctgtatgtgtcagacacttcaggggtctactacactctggctctggagaatgtg
gtcagcagcatgggccccgagggaaacgtcatggtcgacctctacgaggtagcgggaata
aaaggaatgttcctcgccaacaaaaggacggacaaccaagtgaagacgtacatcacctac
aacagaggcagagactggaagttactgcaggcaccgagcaaagacctgagaggcaacagc
attcactgtgtgctgccgtactgttcactacatctccatcttcacgtgtctgcaaatccc
tacacatctggaaacatagccagcagggactcggcgccggggatcattgtcgcatcaggc
tccattggggcagaactgaccacgagcaatgtcagtgtgttcatcacctcggacgcagga
aacacgtggagacagatttttgatgaggagtatgcagtgctgtatcttgaccaaggaggg
gctttggtggcaataagacatactccgcttcccatccgacacctgtggttgagcttcgac
gaaggacggcagtggaacaaatacagcttcaccaacacgcccttgtttgtggacggggtg
ctcggagagcccggagaggagactctcatcatgacgatatttggacatgtcagtcatcga
tcggagtggcaactggtgaaaatagacttcaggtccattttcaacaggaggtgtatagag
gcagattatcagacatggcacctgcacaaccagggtgagccgtgtctgatgggagtcaaa
agaatctaccgaaagctgaagcccacatccaggtgcgttatgggaaagacatactcagtg
accatgacatcggcaccatgcgactgcacagaggctgactttgaatgtgattacggcttt
gagagacggacggacggcaagtgcacccctgccttttggttccatccatcatcgatgtcc
aggagttgcaccacggggatgactttccttaacagcaccggctacagaaaagtggtctcc
aatacctgtacagctggtgtgagcgcagagtacacagccaggaggcagcattgtcctatc
caagcacccaaaggtctccacctggttaccagtgagggttcgctgacagccgtgttaggc
accaatgtcacctttcttgtttttctggaggagggtgacggggcgaggacgagcatcact
ctggactttggagatggccacgctcttacatattccaacgtgagctccatcgaggagggg
atcaaacacatctacaaagctgtgggaatctaccgagtgaccgctaccggggagaacagc
ttgggctcagagaccgccatgctctacctgcatgtcacatgtcagctggagtatatccat
ctctcagctccatttgtggctgtgaggaataaggaagtgaacctgactgctgttctgtgg
cccggccaagtgggaacggtcacctacatctggtggatcggaaataacacagagccagta
atcaccctagagggaagtgtggcgtacacattctcccgggaaggcatcaatacagtcact
gtgcaggtgtctgcagggaatactattctgcaggacagaaaaaccatcgctgtacacgaa
tatttccgatctcatctgctcgccttttcatcaaacctggatgagcacaaccccgatatt
gcagaatggagactggatgtgagccgagtcattaagaactctctgatccaggctacaggc
gtgagagaggatcagctcctggtcactgtcctcccaggtttacccacagcagcagagttt
ttcctcctgcctgacaaacagataactgaggggaaaccagagaagagctcagctcattta
gatcagctttccgagcttttgctcagcgcgctgaatcaaaatctcgtccagttcacgttg
cggcccggggtccaagtcaccgtgtatgcagcgcacttatcagcagcgcccctagtggac
accagcgagaaccacagtggctctgccatgctaatgctgctatcagtagtggttgtgggt
ttagctgtatttgtcatctacaaattcaagaggaagatcccaggcctcaacgtctatgcg
cagatgcagaacgaaaaagaacaagaaatgagtccagcgaatccaacggtggccacgccc
agctctcagcaggacttggtgcattctttggagattctggacacagagtttaactcgcgg
cccatcggatgtatgaaacctcatgtacatgtgaaattttccacagaactccccacgtac
atcgtctaa
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