Maylandia zebra (zebra mbuna): 101472767
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Entry
101472767 CDS
T02814
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101472767 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mze03041
]
101472767 (ddx46)
Enzymes [BR:
mze01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101472767 (ddx46)
Spliceosome [BR:
mze03041
]
Complex A
U2 snRNP components
U2 related factors
101472767 (ddx46)
Complex B
101472767 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
101472767
NCBI-ProteinID:
XP_012777484
UniProt:
A0A3P9BQ11
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All DBs
Position
LG10:23003336..23016637
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AA seq
1059 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSKSRSPDKRSKKDERSRRERSRSRDRRRSRSRDRKRARR
SRSRERRRSRSRDRRRSGSRSRARRSRSGSPSKSSKKDEKAKSKEKDTLEPIAEKKKIKE
EKEDEKVEDQDFDQNKLEEEMRKRKERVEKWREEQRKKAIENIGEIKKELEEMKQGKKWS
LEDDDDDDEDGSAVMEGDDDEEADGKGERQEELKDGKKEGDDDKDKETPMEQQTEEDDID
PLDAYMEEVKQEVKKFNIGAMKGNDKKGAMTVTKVVTVVKTKKGPHTHKKKGELMENDQD
AMEYSSEEEEVDLQTALTGFQTKQRKILEPVDHTKIQYESYRKNFYVEVPELAKMTTEEV
NAYRLELEGITVKGKGCPKPIKTWVQCGVSMKILNALKKHGYEKPTPIQAQAIPAIMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQRPLEESEGPISVIMTPTRELALQITKECKKFSK
PLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLGANSGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPLEIQVGGRSVVC
SDVEQHVLVIDEDKKFLKLLEILGHYQEKGSVIIFVDKQEHADGLLKDLMKASYPCMSLH
GGIDQYDRDSIINDFKNGACRLMVATSVAARGLDVKQLILVVNYNCPNHYEDYVHRAGRT
GRAGNKGYAYTFITEDQVRYAGDIIKALELSGSPVPPELEQLWASFKDQQKAEGKTIKSS
SGFSGKGFKFDETEHALANERKKLQKAALGLQDSDDEDGALDIEEQIESMFNSKKRVKDL
SAPGAAAGPAGAVAATAAAPGGLPGLGPTSAGNIQKLEMAKRLALKINAQKNLGAEAQDV
MQQATNAILRGGTIMTPSVSAKTIAEQLAEKINAKLNYTPVEKLEEERQAAEQAETVRRY
EEELEINDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIES
ANELAVQKAKTEITRLIKEELIRLQNSYQPTSKGRYKVL
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtgagtcgaggcattaccggaaacgttccgcatctcggggacggtcgggtagc
cgatcaaagagtcgctccccggacaagcgctccaagaaagacgagcggagccggagggag
aggtcacggagccgggatcgccgcaggtcgcgctccagagacagaaaacgagccaggcgc
tccaggagcagggagaggaggaggtcgagaagccgagacaggaggcggtcgggcagcaga
agccgagcccggaggtcccgctctggtagccccagcaagagcagtaaaaaggatgaaaag
gctaaaagcaaagagaaggacaccctggagccaatagctgaaaagaaaaagattaaagag
gagaaagaagatgaaaaggttgaggatcaagactttgaccagaacaaactggaggaggag
atgaggaagaggaaggagcgggtggagaagtggagggaagagcagaggaagaaggccatc
gaaaacatcggagagatcaagaaagaactggaggagatgaagcagggcaagaaatggagc
ctggaggacgatgatgacgatgacgaggacggttctgctgtaatggagggagatgatgac
gaggaggcggacgggaaaggggaaaggcaagaggagttaaaggatggtaagaaagagggt
gatgacgataaggacaaggagactcccatggagcagcagacagaggaggatgatatagat
cccctggatgcctacatggaggaggtgaaacaggaagtgaagaagttcaacattggagcc
atgaaaggaaatgataagaaaggtgcaatgactgtgaccaaagtggtgacagtcgttaaa
accaagaaaggacctcacacgcacaaaaagaagggagagctgatggagaatgaccaggat
gccatggagtactcatcagaggaggaagaggttgatctccagacggctctgacaggcttc
cagaccaaacaaaggaagatcctggagcctgttgaccacacaaagatccagtatgaatcg
taccgcaaaaacttctacgtggaggtgcctgagctggccaagatgactacagaagaagtg
aatgcgtacaggctggaactggaaggcattacggtgaaagggaaaggctgtcccaaaccc
atcaagacatgggtgcagtgtggagtgtcgatgaagatcctgaacgccctgaagaagcac
ggttatgagaaacccacacccatccaggcccaggccatccctgccatcatgtcgggccga
gacctcattggtattgctaagaccggcagcgggaaaaccatagctttcctgctgcccatg
ttccgacacatcatggaccagagacccctggaggaatccgagggcccaatctctgtaatt
atgactccaaccagagagctggctctgcagatcacaaaggagtgtaagaaattctctaaa
ccgctgggactcagggtggtgtgtgtttatggaggcacgggcatcagtgaacagatcgct
gagctgaagagaggagctgagatcatcgtgtgcacaccaggaagaatgattgacatgttg
ggggccaacagcggtcgggtaaccaacctccgcagagtcacatatgtggtcctggatgag
gcagacaggatgtttgacatgggcttcgagccacaggtgatgcgtatcgttgacaacgtg
cgtccagaccgtcagacggtcatgttctcagcaactttccccagagccatggaggcgctg
gctcgcaggatcctgtcaaagcccctggagatccaggtgggaggccgcagtgtcgtctgc
tctgatgtggagcaacacgtgctagtaatcgatgaggacaagaaattcctgaagctgctg
gagattctgggtcactaccaggaaaaaggatctgttatcatctttgtggacaaacaggag
cacgcagacggactgctcaaagacttgatgaaagcctcgtacccctgcatgtctttacat
ggaggaatcgatcagtacgacagagacagcatcatcaacgattttaagaatggagcgtgt
cgtctgatggtcgccacctctgtggcagccagaggccttgatgtgaagcagctgatcctg
gtggtcaactacaactgtcccaaccactacgaggactacgttcacagggccgggcgcacg
ggcagagcaggcaacaagggatacgcctacacgttcatcacggaggatcaggttcgctat
gctggcgatatcattaaagctctggagctgtcgggctctccggtcccaccagaactggag
cagctttgggcctcttttaaagaccaacaaaaagcggagggtaagaccattaagagcagc
agtggtttctcaggaaaaggcttcaagtttgatgagactgagcatgctctggccaatgag
aggaagaagctgcagaaagctgctctcggtttgcaggactctgacgatgaggacggagcc
ctggatattgaggagcaaatcgaaagtatgtttaattccaagaagagggtgaaggatctg
tctgctccgggcgcggctgctggtccagctggagctgttgccgccacagcggctgccccc
ggaggtttgccaggactcgggcctacgtctgctggtaacatccagaaattggaaatggcc
aaaaggctggcgctcaagatcaacgctcagaagaacctgggcgctgaggctcaggatgta
atgcagcaggcaaccaacgccatcctgcggggcggcaccatcatgaccccctcagtgtca
gccaaaaccatcgcagagcagctggcagaaaagatcaatgcaaagctcaactacaccccg
gtggagaagctggaggaggagcggcaggcggctgagcaggctgagacagtcaggagatat
gaagaggagctggagatcaacgacttccctcagactgccaggtggaaggtgacatctaaa
gaagctttgcagaggatcggtgaatactctgaagctgccatcaccatcagaggaacgtac
ttccctccaggcaaagagcccaaggaaggagagcgcaagatctacctggctattgagagt
gcaaatgaactggctgtgcagaaagccaaaacagaaattacacggctaatcaaggaagag
ctcatccgattacaaaactcctaccagccgacgagcaaaggccggtacaaagtgctgtag
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integrated database retrieval system
