Maylandia zebra (zebra mbuna): 101487436
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Entry
101487436 CDS
T02814
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
101487436
Enzymes [BR:
mze01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101487436
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101487436
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4
Pox_A_type_inc
zf-RING_2
Endonuclease_7
zf-RING_UBOX
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
101487436
NCBI-ProteinID:
XP_012779844
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Position
LG23:660268..687928
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AA seq
559 aa
AA seq
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MDLHRPFKMDSPSYLPAPLASPALMVLASTAESGRDASVPCQAPRPFGVPVSVEKDLHLP
FPSASYTFTSMYQRQGPMSGTFSSRDFPASLLHLHPQFTPPNLDCSTLGMLNHSGVGAFR
PFSSPQDERESGGYQSAFTPAKRLKSCFPEVEGKEFDFGSLGGSLKAGEESGRKLFSMSG
LLSDGEASSSPEERKEHSKVKGLYDAQAPACPVCKAVLRPGELQEHMEQELAKLAQLQIS
ATPVQRDHFIRTPKPLSLSLHIKREGSSPTSPPRPAEEAHSDRYQTFLRVRANRHTRLNV
DDLCWCRCYVKSAPLRPHSAGAHLDCAQAVRMGKLKRRKPEEAQEGSADLLALEDDWNER
RRIQMASIGFKGAMLVSTTSKECRDSDADLDVDGDDTLEYGRAQYTDTDVIPCSGESSKE
TAVNSNSSSVPPESRVNLDFNKWSNDGSPSTSSGEKQDGSAAGLTQTCKNAEIEMLSEDS
TLTTLDALKARIRDLEKQLSKGDRFKCLICMDTYTTPLTSIQCWHVHCEECWLRTLGAKK
LCPQCNTITSPGDLRRVYL
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggacctccaccgccccttcaagatggacagcccctcctacctaccggctccactggcg
tcccctgccctgatggtcctagcttccactgcagagtctggccgagacgcctctgtcccc
tgccaagcgccgaggcccttcggcgtccccgtctctgtggagaaggacctccacctcccc
ttcccttcagcctcctacacgtttacctccatgtatcagcgccagggccccatgtcaggc
accttttcgtcccgagacttcccggcctccctgctccacctgcacccacagttcacccca
ccaaacctggactgctccaccctgggcatgctcaaccacagcggtgtgggcgccttccgg
cctttctcctcgcctcaagatgagagggagtccgggggttaccaatctgctttcaccccc
gccaagaggctgaaaagctgctttccagaggtggaggggaaggagtttgactttggctcc
ctcggaggctccctcaaagctggggaggagtcggggaggaagctgttctccatgtccggc
ctgctgtctgatggagaggcttcatcgagccccgaggagcgcaaagagcacagcaaagtc
aaaggtctgtatgacgctcaggccccggcgtgtccggtctgcaaggccgtgctgcgaccc
ggagagctgcaggagcacatggagcaggagttagccaaactcgcccagctgcagatcagt
gcaactccggtccagcgcgaccacttcataaggacgccaaagcctctttcactgtccctg
cacatcaagcgagagggaagttcgcccacctcgccccctcgaccggccgaggaggcccac
tctgaccgataccagacgtttctccgcgtccgggccaacagacacaccaggttaaacgtc
gatgacctctgctggtgcaggtgctacgtcaaatctgccccattacgcccccacagcgca
ggagcccacctagactgcgcacaagctgtcaggatgggaaagctgaagaggagaaaacca
gaggaagcacaggaggggtcggcagacctgttggcattggaggacgactggaatgagagg
agaaggatacagatggcgtctataggctttaaaggtgcaatgttggtgagcaccacctct
aaggagtgtcgagacagcgatgcagacctggacgtggacggagatgacacgctggagtac
ggccgggcacaatacacagacacagacgtgattccctgttcgggagaaagctccaaagag
acagcagtgaacagcaacagcagcagcgtgccgcctgaatccagagtaaacttggacttt
aataaatggtcaaatgatggaagtccgtctacaagcagtggagagaaacaggatggcagt
gcagccggtctcactcaaacctgcaaaaacgctgagatagagatgctctcggaggactcc
acgctgacaacattagatgcacttaaggctcggatacgggacttggagaaacagctgtct
aaaggagacagatttaaatgtctcatctgcatggacacctacacaacgccgctcacctcc
atccagtgctggcatgttcactgtgaggagtgttggcttcgaacgctgggagcaaagaag
ctgtgtcctcagtgcaacaccatcacctcacctggagacctgaggcgagtttacctgtga
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