Maylandia zebra (zebra mbuna): 101487923
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Entry
101487923 CDS
T02814
Symbol
gtf2h4
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
mze
Maylandia zebra (zebra mbuna)
Pathway
mze03022
Basal transcription factors
mze03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101487923 (gtf2h4)
09124 Replication and repair
03420 Nucleotide excision repair
101487923 (gtf2h4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mze03021
]
101487923 (gtf2h4)
03400 DNA repair and recombination proteins [BR:
mze03400
]
101487923 (gtf2h4)
Transcription machinery [BR:
mze03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
101487923 (gtf2h4)
DNA repair and recombination proteins [BR:
mze03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
101487923 (gtf2h4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
101487923
NCBI-ProteinID:
XP_004573689
UniProt:
A0A3P9CMK1
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All DBs
Position
LG22:complement(29090914..29101284)
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AA seq
461 aa
AA seq
DB search
MKLRVQLQCKNLHEYLKELSPEILDRLYNHPATCLAVYRELPSLAKNYVMRMLFLDQPLP
QAAVALWVKKDSQKDHDECVSVLAGLRLWHSQQLQGGLQGYILNPVFKDNLRTALLGGGR
AWADEGSTLGPDRHARDIESLDRYAMERWEIILQFMVGSPSAVSQDLAQLLVQAGLMKSE
AGEAPYITSAGFQFLLLDTASQLWYFTLQYLKTAQSRGMDLVEILSFLFQLSFSSLGRDY
SVEGMSESLLTFLQHLREFGLVFQRKRKSRRYYPTRLAITLAAGVASSSSSSNLASSPGT
GDAGFIVVETNYRIYAYTNSELQIALVALFSEMLYRFPNVVVAQLTRESVQQAIANGITA
QQIIHFLRTRAHPVMLTRTPVLPPTITDQIRLWELERDRLQFTEGVLYNQFLSQADFEVL
RDRAQGLGCLVWQDVAHRVMVVTPQGHSEVKRFWKRQRSHT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgtgtccagctgcaatgcaagaacctgcatgaatacctgaaggagctgagt
ccggagattttggacagactctacaaccacccagcgacatgcctggctgtgtacagggaa
ctcccctctctagcaaagaattatgtgatgcgcatgctgttcctggatcagcctctcccc
caggcagctgtggcattgtgggtaaagaaagacagtcagaaggaccacgatgaatgtgtc
tcagtgttggctggtctccgcctctggcacagtcagcagctgcagggtggtctgcaggga
tacattttaaatccggtgtttaaagacaacctgaggacagctttgctcgggggggggcga
gcttgggctgatgagggcagcacgctgggccctgaccgccatgcacgagacattgagagt
cttgaccgctatgctatggagcgctgggagatcatcctgcagtttatggtgggttctccc
agcgctgtcagccaggacctggcacagcttttggttcaagcaggcctcatgaaaagtgaa
gcaggagaggcgccctacatcacctcagctggcttccagttcctccttctggacacagcc
tctcagctatggtacttcaccttgcagtacctcaaaactgctcagtccagagggatggac
ctggtggagatcttgtcattcttattccagctcagtttctctagtctgggcagagattac
tcggtggagggtatgagcgagtcattactgacttttctgcagcacctgcgagagtttgga
ctggtgttccaaagaaagaggaagtccaggagatattatcccaccaggctggcaatcact
ctggctgcaggagtcgccagcagctcctcctcctctaacctggcttccagtcctggtact
ggagatgcaggtttcattgtggtggaaaccaattatcgtatctatgcctacacaaattca
gaacttcagattgctctggtggctctcttcagtgaaatgctctaccgcttccccaatgta
gttgtggctcagctgacaagggagtctgtgcaacaggctatcgccaacggaatcactgca
cagcagattatccattttctgaggaccagagctcaccctgtcatgctcactcggaccccg
gtgctgcctccaactataacagaccagatcagactgtgggagctggagagagatcgcctg
cagttcacagagggtgtgctctataaccagttcctctcccaggctgactttgaggttctg
cgagacagagctcagggcctgggctgtctggtgtggcaggatgtggcccacagagtgatg
gtggtgacaccacagggacacagcgaggtcaagaggttctggaaacgtcagcgatctcac
acgtaa
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