Maylandia zebra (zebra mbuna): 112433245
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Entry
112433245 CDS
T02814
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
mze
Maylandia zebra (zebra mbuna)
Brite
KEGG Orthology (KO) [BR:
mze00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mze04121
]
112433245
Ubiquitin system [BR:
mze04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
112433245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_10
U-box
zf-Nse
zf-RING_6
RSS_P20
TRAF3_RING
zf-ANAPC11
MRP-S31
zf-UDP
Motif
Other DBs
NCBI-GeneID:
112433245
NCBI-ProteinID:
XP_024657277
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Position
LG3:complement(9161337..9163544)
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AA seq
567 aa
AA seq
DB search
MAQKGVQLDRETFSCSICLDLLKDPVTTTCGHSYCRNCIKSFWDEEDRKGIHSCPQCRKT
FTPRPVLEKNTMLAALVEQLKKSGLQAAPADHCYAGPEDVACDVCTGRKLKAIKSCLVCL
ASYCEKHLQPHYESQTFKKHMLVKTSVKLQDNICSRHDEVMKIFCRTDQQSICYLCTMDE
HKGHETVPAAAERTEKQKELEVRRLNIQQRIQEREKDVKLLQQEVEAINGSADKAVEDSE
KMFTELIRLLQKRSSDVKQQVRSQQETEVSRVKELQEKLEQEIAELKRKDGELEQLSHTE
DHNQFLHNYPSLSALSESTHSSSINIRPLSYFEDVTAAVSETRDKLQDILREEWTNISLT
VTEVDVLLSPPEPKTRAGFLKYSHEITLDPNTANRRLLLSEGNRKVTLMNQQQSYSDHPD
RFTVWCQVLSRESLTGRCYWEVEWRGGAFRVAVAYKNISRAGGGYECLFGNNNKSWALDC
DTDSCKFWHTKVQTVLSGPQSSRVGVYLDHRAGILSFYSVSETMTLLHRVQTTFTQPLYA
GLGLYYSDGATAELIKVKQRRQVHVDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagaaaggagttcagctggaccgagaaaccttctcttgttccatctgtttggat
ctactgaaggatccggtgactacaacctgtggacacagctactgcaggaactgtattaaa
agtttctgggatgaagaggacaggaagggaatccacagctgccctcagtgcaggaagact
ttcacaccgaggcctgtcctggagaaaaacaccatgttagcagctttagtggagcagctg
aagaagagtggactccaagctgctccagctgatcactgctatgctggacctgaagatgtg
gcctgtgatgtctgcactgggaggaagctgaaagccatcaagtcctgtttagtctgtctg
gcctcttactgtgagaaacacctccaacctcactatgaatctcaaacttttaaaaagcat
atgctggttaaaacttctgtgaagctccaggacaacatctgctctcgtcatgatgaggtg
atgaagattttctgtcgtactgatcagcagagtatctgttatctctgcacaatggatgaa
cataaaggccatgaaacagtcccagctgcagcagaaaggactgagaagcagaaggagctc
gaggtgagacgactaaacatccagcagagaatccaggagcgagagaaagatgtgaagctg
cttcaacaggaggtggaggccatcaatggctctgctgataaagcagtggaggacagtgag
aagatgttcactgagctgatccgtctcctccagaaaagaagctctgatgtgaagcagcag
gtcagatcccagcaggaaactgaagtgagtcgagtcaaagagcttcaggagaagctggag
caggagatcgctgagctgaagaggaaagacggcgagctggagcagctctcacacacagag
gatcacaaccagtttctacacaactacccctcactgtcagcactcagtgagtctacacac
tcatccagcatcaatattcgtcctctgagctactttgaggatgtgacagcagctgtgtca
gagaccagagataaactacaggacattctgagagaggaatggacaaacatctcactgaca
gtcactgaagtggatgttttactgtcaccaccagagccaaagaccagagctggattctta
aaatattcacatgaaatcacactggatccaaacacagcaaacagacgtctgttattatct
gaggggaacagaaaagtaacattgatgaaccaacaacagtcttattctgatcatccagac
agattcactgtatggtgtcaggtcctgagtagagagagtctgactggacgttgttactgg
gaggtggagtggagagggggagcatttcgtgtagcagtcgcatacaagaatatcagcaga
gcaggggggggctatgaatgtttatttggaaacaataacaaatcttgggcattagattgt
gacacagacagttgtaaattttggcacaccaaagtccaaactgtcctctcaggtcctcag
tcctccagagtaggagtgtacctggatcacagagcaggtattctgtctttctacagcgtc
tctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctctatgct
ggacttggtctttattactctgatggagccactgcagagttgattaaagtcaaacagaga
agacaggttcatgttgatccctga
DBGET
integrated database retrieval system
