KEGG   Natrarchaeobaculum sulfurireducens AArc-Mg: AArcMg_2244
Entry
AArcMg_2244       CDS       T05593                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nag  Natrarchaeobaculum sulfurireducens AArc-Mg
Pathway
nag03030  DNA replication
nag03410  Base excision repair
nag03420  Nucleotide excision repair
nag03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    AArcMg_2244
   03410 Base excision repair
    AArcMg_2244
   03420 Nucleotide excision repair
    AArcMg_2244
   03430 Mismatch repair
    AArcMg_2244
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nag03032]
    AArcMg_2244
   03400 DNA repair and recombination proteins [BR:nag03400]
    AArcMg_2244
Enzymes [BR:nag01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     AArcMg_2244
    6.5.1.6  DNA ligase (ATP or NAD+)
     AArcMg_2244
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     AArcMg_2244
DNA replication proteins [BR:nag03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    AArcMg_2244
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     AArcMg_2244
DNA repair and recombination proteins [BR:nag03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     AArcMg_2244
   NER (nucleotide excision repair)
    Other NER factors
     AArcMg_2244
   MMR (mismatch excision repair)
    Other MMR factors
     AArcMg_2244
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: AXR82241
UniProt: A0A346PRU6
LinkDB
Position
2277452..2279206
AA seq 584 aa
MEFATFADRAAAIEAEPADLEIVDHVRALLEDASDDDRGEPQTLEIVARFVQGRVVPAWD
STTLDIGPSTCYEAIARAAGTNVSADDVENRLAERGEIGDVAASYDFGGQQGLNAFTTGG
DDGTGGLTVREVYETLVDLAAADGSGSQDRKVDLLFGLFNRCSSDEARYLARLVLSEMRI
GVGEGTVRDAIAAAFDVPVDNVERALQVTNDYGQVARIAREEGLDGLDAVDLAVGRPVQA
MLAQAGTVTDALEEWDEAAVEWKYDGARIQLHHDPDGIETETTAGEAGSTRVYSRNMEDV
TAALPEVVEYAAETLERPAIIDGEVVAVDEAGEPLPFQEVLKRFRRKHDVAKAREDVAVR
PVFFDCLHADGEDLLEEPLADRHDRLEDLLAAAQPDGPDPGDVDGLSLLWLTDDPAEIEA
IDAEALESGHEGIMLKNPDSTYSPGRRGKHWRKRKPDVETLDCVVTGAEWGEGRRATFLG
TFELSVRNETTGDLETVGKVATGITDAQLAELTDLLEPHVANEDGQAVDIAPAIVFEVGY
EEIQTSPTYSSGYALRFPRFLGVRHDKDPEDAETLERLERLREP
NT seq 1755 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgagccgccgccatcgaagccgagcctgccgacctg
gaaatcgtcgaccacgtgcgtgccctgctcgaggacgcgagcgacgacgaccgtggcgaa
ccgcagactctcgagatcgtcgcccggttcgtccagggacgggtcgttcccgcgtgggac
tcgacgacgctcgacatcgggccgagcacctgttacgaggcaatcgcccgcgcggctggg
acgaacgtgagcgccgacgacgtcgagaaccgactcgccgagcgcggggagatcggcgac
gtggcggcgagctacgacttcggcggccagcaaggcctgaacgcgttcacgactggcggt
gacgacggcacgggcgggctcaccgtccgcgaagtgtacgagacgctcgtcgacctcgcc
gccgcggacggatcggggagccaggaccgcaaggtcgacctgctcttcgggctgttcaac
cgctgctcgagcgacgaagcccggtatctcgcccgactcgtcctctcggagatgcgcatc
ggtgtcggcgagggcaccgtcagagacgctatcgctgcggcgttcgacgtcccggtcgac
aacgtcgagcgcgccctgcaggtgaccaacgattacggacaggtcgcgcggatcgcccgc
gaggaggggctggacggcctcgacgcggtcgacctcgcggtgggccggcccgtccaggcg
atgctcgcccaggccggcaccgtcaccgacgcgctcgaggagtgggacgaggccgccgtc
gagtggaagtacgacggcgcgagaatccagttacaccacgatcccgacgggatcgaaacc
gagacgacagcgggcgaggcggggtcgacccgcgtctactcccggaacatggaagacgtc
accgccgcgttgccggaggtcgtcgagtacgccgccgagaccctcgagcgtccggcgatc
atagacggtgaggtcgtcgccgtcgacgaggctggcgagccgctcccgttccaggaggtc
ttaaaacggttccgacgaaagcacgacgtggcgaaagcccgcgaggacgtggccgtccgc
cccgtcttcttcgactgtctgcacgccgatggcgaggacttgctcgaggagccgctggcc
gaccgtcacgaccgactcgaggacctgttagccgcggctcagcctgacggccccgatcct
ggggacgtcgacggcctctcgttgctgtggctcaccgacgacccagccgagatcgaggcg
atcgacgccgaggcgctcgagtcgggccacgaggggatcatgctcaaaaaccccgactcg
acgtactcgccgggtcgacgcggaaaacactggcgcaagcgcaaacccgacgtggagacg
ctcgactgcgtcgtcaccggtgcggagtggggcgagggccgccgggcgacgttcctcggc
accttcgaactctccgtccggaacgagacgacgggcgacctcgagaccgtcggcaaggtc
gcgaccggaatcacggacgcacaactcgcggagctgacggacctactcgagccccacgtc
gcgaacgaagacgggcaggcggtcgacatcgcgcccgcgatcgtcttcgaggtcggctac
gaggagatccagacttcgccgacgtactcgtcgggctacgccctgcgattcccgcgattc
ctcggcgtccgccacgacaaggaccccgaggatgcggagacgctcgagcgactcgagcgg
ctacgggagccgtaa

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