Nocardia arthritidis: F5544_03785 Help Entry F5544_03785       CDS       T06735                                  Name (GenBank) ATP-dependent DNA ligase   KO K01971   bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] Organism nah  Nocardia arthritidis Pathway nah03450   Non-homologous end-joining Brite KEGG Orthology (KO) [BR:nah00001]  09120 Genetic Information Processing   09124 Replication and repair    03450 Non-homologous end-joining     F5544_03785  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:nah03400]     F5544_03785 Enzymes [BR:nah01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      F5544_03785 DNA repair and recombination proteins [BR:nah03400]  Prokaryotic type   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     Two-component NHEJ DNA repair complex      F5544_03785 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  LigD_Prim-Pol LigD_N DNA_ligase_A_M DNA_ligase_A_C DNA_primase_S Motif Other DBs NCBI-ProteinID:  QIS08671 UniProt:  A0A6G9Y637 LinkDB All DBs Position 804989..807247 Genome browser AA seq 752 aa AA seqDB search MVVRRKFGDIEVELNNLDKVLYPATGTTKGELIAYYTAIAPAMLPHIADRPVTRKRWPNG VDESSFFEKNLSDHAPSWIPRRAVEHSRGKQVVYPLIDSVAGLAWIGQQAALEVHVPQWR FDGLEPGPATRLVFDLDPGPGTGLAECAAVALAVRDMVEDIGLHAFPVTSGSKGIHIYVP LDRVLSPGGASTVAKQVATNLEKLRPDLVTATMAKSARGGKVFLDWSQNNPSKTTIAPYS MRGRMHPNVAAPRAWAEIEDRKRLRHLAFDEVLARFRDDGDLLAELDTAPRPDALAKYRS MRDPARTPEPVPAAAPSAGPGNRYVVQEHHARRLHWDVRLERDGVLVSWAVPKGPPTSSD QNRLAVHTEDHPLEYLEFHGAIPKGQYGAGEMMIWDAGTYETEKWRDDEVIVEFHGQRLN GRYAFIQTNGNQWLMHLMREQVRPEPEDNGAQKVSRGSAPFPRGLEPMLATQGEVAELDD RDWCFETKWDGFRLIAEIQSGTLTLRSRRGNVVTDRYPGIGALARELAGHDVVLDGEAVV FDDHDVSMLGLLQADAARAVFVAFDVLYLDGTSLVRKRYSDRRRVLEALAANAPSMRVPP RLDGPGEQALRYSQEHGLEGVVAKRKDSVYLPGKRGHSWVKQRNWRTQRVVVGGWRRSDA REFKSLLIGIPHEGRLYYVGRVGTGFDDSDMRDLAKQLRRLERKTSPFDNDLTKEEREAA VWVSPKIVGTVRFMNWTEAGRLWHPAWLGTVE NT seq 2259 nt NT seq  +upstreamnt  +downstreamnt atggtggtgcgccggaaattcggcgatatcgaggttgagctgaacaacctcgataaagtg ctgtacccggcaacgggtaccaccaagggcgagctgatcgcctattacaccgcgatcgca ccggccatgctgccgcatatcgcggaccgccccgtcaccaggaagcgctggcccaatggg gtcgacgaatcgtccttcttcgaaaagaatctctccgaccacgcgccgtcgtggattccg cggcgcgccgtcgaacattcgcggggcaagcaggtcgtttatccgctgatcgattcggtg gccggactggcctggatcgggcagcaggcggcgttggaagtccatgtgccgcaatggcgt ttcgacggtttggagcccgggcccgccacccggctggtcttcgatctcgacccgggaccg ggcaccgggctggccgaatgcgcggccgtcgcgctggcggtccgggatatggtcgaggac atcggcctgcacgcattcccggttaccagcggcagcaagggaattcacatctatgttccg ctggaccgggtgctgagcccgggcggcgcgtcgacggtggccaaacaggtggccacgaat ctcgagaagctgcgacccgatctggtgaccgcgacgatggcgaagtcggcacgcggcggc aaggtattcctcgactggagccagaacaacccgtcgaagacgaccatcgcgccgtattcg atgcgtggccgaatgcacccgaatgtggcggcaccacgcgcctgggccgagatcgaggac cggaaacggttgcggcacttggccttcgacgaggtgctcgcgcgcttccgagacgacggc gatctgctcgccgaactggacaccgcaccgcgacccgatgcgctcgccaaataccgttcg atgcgcgatccggcgcgcacgcccgagccggtaccggccgcggctccgtcggccgggccg ggcaatcgctatgtggtgcaggaacatcacgcccgccgcctgcactgggatgtgcggctg gaacgcgacggtgtgctggtctcgtgggcggtgccgaaggggccgcccacctcgtcggat cagaaccggctcgcggtgcacaccgaggatcatccgctggagtatctggaattccacggc gcgattcccaaggggcagtacggcgccggggagatgatgatctgggatgccggaacctac gagaccgagaagtggcgcgacgacgaggtgatcgtcgaattccacgggcagcggctcaac ggacggtacgcgttcatccagaccaacggcaatcaatggctgatgcacctgatgcgagag caggtccgtccagaaccggaagataatggggcacaaaaggtttcacgcgggtcggcgcca ttcccgcgcgggctggagccgatgctcgcgacgcagggtgaggtagccgaactcgacgac cgggactggtgtttcgagacgaagtgggacgggttccggctgatcgccgagatccagtcc ggcacgctgactttgcgcagccgcaggggcaatgtggtgaccgatcgctatccgggcatc ggtgcgttggcgcgcgaactcgccgggcatgatgtggtgctcgacggcgaggcggtggtg ttcgacgaccacgacgtgtccatgctcggcctgctgcaggcggatgcggcgcgggccgtc ttcgtggccttcgacgtgctgtatctggacggcacttcgcttgtccgcaaacggtattcg gaccggcggcgggtgctggaggcgctggcggccaacgcgccatcgatgcgggtgccgcca cggctggacgggccgggcgagcaggcgctgcgctacagccaggagcacgggctggagggt gtcgtcgccaaacgcaaggattcggtgtacctgccgggcaagcgcggacattcgtgggtc aagcagcgcaactggcgcacccagcgggtggtggtaggcggttggcggcgcagcgacgca cgggaattcaaatcgctgctgatcgggataccgcacgaggggcggctgtactacgtcggc cgggtcggcaccggattcgacgattccgatatgcgggatctggccaaacagctgcgcagg ctggaacgcaaaaccagcccgttcgacaacgacctcaccaaggaggagcgcgaggcggcc gtctgggtttcgccgaaaatcgttggcaccgtgcgattcatgaactggaccgaggccggt cggctctggcatccggcctggctcggcacggtcgaatag

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