Necator americanus (New World hookworm): NECAME_06669
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Entry
NECAME_06669 CDS
T04867
Name
(RefSeq) transcription factor Tfb2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03022
Basal transcription factors
nai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECAME_06669
09124 Replication and repair
03420 Nucleotide excision repair
NECAME_06669
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_06669
03400 DNA repair and recombination proteins [BR:
nai03400
]
NECAME_06669
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECAME_06669
DNA repair and recombination proteins [BR:
nai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECAME_06669
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
CNOT11
Beta-lactamase2
SPG4
Motif
Other DBs
NCBI-GeneID:
25346701
NCBI-ProteinID:
XP_013307012
UniProt:
W2TRW7
LinkDB
All DBs
Position
Unknown
AA seq
793 aa
AA seq
DB search
MNSVFTSIQKSGLEYTSSGNEEPLEDEACETVTVKMSGRKKAQKKKGRTKEIGVDDFDDL
VENANDDGCGLSRKFATDIIRLIKCHTKPLSKVAAEFIEIFKDRCSLVVGMALLAIYDDL
ASTDDIASKIVTVYLVYRVRDIEVALRRRNPGGIDDILGHPFMSFFLNLANLGFTEAEQY
YVKQTARWPEHLDMVTIPAILPFPDPEDNSLHDLTQDALLMSLMQRISCEPLKQLPFKTT
PLMPPLYPIQPIELGCDDFDELRNRVADTNPPTPGTSKEKTKFQNHNLQAPISAVPNSSQ
ELTEEQMAEFTKRLLDGKSLTQSETKQMLKSLERADANNKFVNQFVQMSDADLSRLIDLN
VKIAIEVIDLCVSADQALANRVMRIVQGMDVTVQCMEVVTRLYQYRPELSREPLNDYVRY
CVRYCLDAIPSSNLNRVVRLVAITLKNLLKSGSISASELSLELREFGVRFCQHPDTTFLF
NTVGLAQLRDARETVAKTLKVSTFDEVAVENTATDLPVDPMAAAGTLPSSGNLFLDYICT
LSNDDRSFLYAQPACDLFIALFVFRMLPSVSQQIVIKMIWNPSTSGSFSLSNAELESSHK
LLIKLGIVGGSGNLHPSFRQSYLRSIMLGTQKCAKIKPVEVDSKRKQNEKELGKKAGERW
ECILRYLALPSDKNMNSVSSTTRELFSAAGFTSDSDGSLELEITSAGFQFLLLSPVQQLW
TYMIEYLKLENSKGRDIRPIIDLLIRVILCVVIGGDFSNTAFEINTGWTEEQTTLVMHMR
ELGLIFIRKRKDG
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggtttttaccagcattcagaaatcaggattggaatacacttcttccggaaat
gaggaaccgttagaagatgaggcgtgtgaaactgtaaccgttaaaatgagcggtaggaag
aaagctcagaagaaaaaaggacgaactaaagagattggggttgacgacttcgacgatctt
gtggaaaatgccaacgatgatggatgtggtctgtcaagaaagtttgcgacggacattatc
aggttaattaaatgtcataccaagccattaagtaaagtggctgcagaatttatcgagatt
ttcaaagatcgttgttcacttgtcgttggtatggctttgcttgcaatctatgacgattta
gcttctactgatgacatagccagtaaaatcgttacagtttacttggtctacagggttcgt
gatattgaagttgctcttcggagaagaaatcctggtggtatcgacgacatcttgggacat
cctttcatgtcattcttcctgaatctcgcaaacctcggtttcactgaggctgagcagtat
tatgtcaaacagacagcacgttggccagaacatctagacatggtgacgattcctgccatt
ctcccatttcctgatcctgaggataatagtcttcacgacttgacgcaggatgctttgctc
atgtctctcatgcagcggatttcttgtgagccattgaagcagctccctttcaaaaccaca
ccgcttatgccgccgctatatcctattcagcccattgagctcggatgcgatgattttgac
gaactacggaatagagtagccgatacaaatcctcctacacccggtacctcgaaggaaaaa
acaaaatttcaaaaccataatctgcaagcacccatttccgctgtccccaattcttcgcag
gagctcactgaggagcaaatggcagaatttacgaaacggctgcttgatggaaagtcgtta
acgcagtccgaaaccaaacagatgctgaagtcccttgaacgcgccgatgccaacaacaag
tttgtgaatcagttcgttcagatgagtgatgcagatctatcgcgcttgatcgatttgaac
gtgaaaatagctatagaggtaatcgacttatgtgtgtccgctgatcaggcattagcaaac
agagttatgcgaatagtacaggggatggatgttactgtccaatgtatggaggtggtcact
cgtctttatcagtatcgacccgaactttctcgggagcctctgaacgattatgttcgttat
tgcgttcggtactgcctggacgcaataccgtcgtccaacctcaatagagtagtgcgcttg
gttgcgataaccttaaaaaatctgctaaagagcggcagcatatcggcatcggagttatca
ctggaactgcgcgagtttggtgtgaggttttgccaacatccagacacaaccttcttgttc
aatactgttggtctagctcagctcagggatgctcgtgagacagtagcaaaaacgctaaag
gttagtacttttgacgaggttgctgtcgaaaacactgcaactgacttgcccgtagaccct
atggctgcagcgggcacattaccatcttcgggtaatctattcctcgactatatttgtacg
ttgagcaatgacgacagatcatttttgtatgcgcagccagcttgcgatctttttatagct
ctcttcgtgtttcgtatgttgccaagtgtctcccaacagatagtaattaagatgatttgg
aatcctagtaccagtggatcgttcagtctttccaacgcagagttggaatcatctcataaa
ttgctgattaaactgggaatcgttggaggcagcggcaatttgcacccttcatttcgtcag
tcatatctccgctctattatgctagggacacagaaatgtgcaaaaatcaaacctgttgag
gtggacagtaaacgaaaacaaaatgaaaaagagcttggaaagaaagctggcgaacgatgg
gaatgtatactaaggtacttagctttaccgtctgacaagaatatgaattccgtatcatcg
actacacgggagttgttctcagctgccggttttacgagtgacagcgatggatctttggaa
cttgaaataacctctgctggattccagtttctgttgcttagtcctgtccaacaactatgg
acgtacatgattgagtatctcaaactggaaaattcaaaaggaagagatatcagaccaata
attgatcttctaattagagtgattttatgtgtcgtgataggtggtgacttctctaacaca
gcctttgagatcaacactggctggacggaagagcaaaccaccttagtcatgcacatgcga
gaacttggattgatttttattaggaagaggaaagatgggtga
DBGET
integrated database retrieval system
