Necator americanus (New World hookworm): NECAME_07146
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Entry
NECAME_07146 CDS
T04867
Name
(RefSeq) transcription factor ssl1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
nai
Necator americanus (New World hookworm)
Pathway
nai03022
Basal transcription factors
nai03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NECAME_07146
09124 Replication and repair
03420 Nucleotide excision repair
NECAME_07146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nai03021
]
NECAME_07146
03400 DNA repair and recombination proteins [BR:
nai03400
]
NECAME_07146
Transcription machinery [BR:
nai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NECAME_07146
DNA repair and recombination proteins [BR:
nai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NECAME_07146
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Fusion_gly
DUF6011
Motif
Other DBs
NCBI-GeneID:
25347176
NCBI-ProteinID:
XP_013306081
UniProt:
W2TQB3
LinkDB
All DBs
Position
Unknown
AA seq
382 aa
AA seq
DB search
MEPMTTEDDDQKGYTWEAGYADGLNIREVLEEDEGGSIEKSIAKLVADARKKQRTLEKPT
KIRLGIMRYVYVCIDCSRSMTSKVMPPSRFFVTAKIVSNFLDRFFEQNPIAQVGLILVKD
KKAERFVSHTGNIRALKDSINSINEAICSGDFSLQNALQLALTNLKSLPGHVSREIIVIM
ASLSTVDPGNIFSTFEILRGHNIRCSVIGLSAELFVCKQLAKITNGRYDIVLDTDHMEML
LYQHTAPPPSTKAAECNAIRVAFPPHVSIKERSFCVCHPMSSPLSTTRGFLCEQCGARHC
SLPAECRVCRLTLVAAPQLARAFRHLLPLPAFVPTPVSEGECMACERPLTEEGFACKSCA
GLFCFDCDILLHESLHVCPNCL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggagccgatgactacagaggacgatgaccagaaggggtatacgtgggaggctggatac
gctgacggcttgaacatccgcgaagttttggaagaagatgaaggcggctcgattgagaag
tctatcgccaagctcgtcgctgatgcgcggaaaaaacaacggacacttgaaaagcctacg
aaaataaggctgggcattatgcggtatgtctatgtttgtattgactgttctcgatctatg
actagtaaggtgatgccaccttctcgattcttcgtgactgcgaagatagtgagcaatttc
ctggatagatttttcgaacaaaatcctattgcacaggtcggacttattttggttaaggac
aagaaagccgaacgttttgtcagccatacaggcaatattcgcgccttaaaagatagcatt
aattcgatcaatgaagccatctgtagtggggatttctcgctacagaatgctctgcagctt
gcattaacaaatttgaaaagcttacctggtcacgtctctcgagagattattgtgataatg
gcaagtttatccacagtagaccccgggaatatattctccacttttgagatcttaagaggg
cacaatatcagatgttcggtgattggccttagcgcagagcttttcgtatgcaagcagttg
gcaaaaattacaaatggacggtatgacatagtgcttgatacagatcatatggagatgttg
ctataccagcacactgctcctcctccatctacgaaggctgcagagtgcaatgctattcgc
gttgcttttcctcctcatgtcagcattaaagaacgttcattctgtgtatgccatccgatg
tcttccccgctgtcgacaactcgtggttttctatgtgaacaatgtggggcacgccattgc
tcgttgccagcggaatgtcgcgtctgtcgacttactcttgttgcagcacctcagcttgct
cgtgcgtttcgtcatttgcttcctctgcctgcattcgttcctactcctgtctcagaagga
gaatgtatggcatgtgaacgtcccttgactgaggaaggttttgcatgcaagtcttgcgca
ggacttttttgctttgactgtgatatacttcttcacgaaagccttcacgtttgtcctaac
tgtttatga
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