Nakamurella sp. PAMC28650: H7F38_02925
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Entry
H7F38_02925 CDS
T08954
Name
(GenBank) ATP-dependent DNA ligase
Organism
naka
Nakamurella sp. PAMC28650
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Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QNK81774
UniProt:
A0A7G8WN31
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Position
complement(654790..657198)
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AA seq
802 aa
AA seq
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MAADSAQVVMDGHRFGLTNLSKVLYPATGTTKADVIGYYAEVAAVMIPLVQGRPVTRKRW
PNGVGTTPFFHKNVDRGTPSWIPTREIPHSDRTITYPLIDSPATLAWLGQNAALELHVPQ
WRFADDGSVGRPDRAVFDLDPGPGVDLAQCAEVARAIRRRLTDLELTAYPVTSGSKGLHL
YVPLPGTQTSEEVSQFAKLLAETVEKDLPALVVSRMSKVLRAGKVFIDWSQNNASKTTIA
PYSLRGREFPTVAAPRTWAELEDPGLAHLDYREVIERVRSGLDPFGADSAGAQTVSNRLA
AYRSKRSAERTPEPVPPADARRGAATGTSTGDTFVIQEHHATALHWDFRLEHDGVLVSWA
VPKGIPTSSQHNRLAVQTEDHPLEYADFAGTIGHGEYGGGEVTIWDSGHYRLEKWRDGEV
IVILDGVRATGRFALIRTKQGAGAGDAAKGNQWLMHRTKDQPDLEPVAPQEGRKFGSDRK
IVHRLPPTDLLPMLASPGTLADVVGDDWRFEGKWDGVRAVVEIGEGHFRLVSRNGNDITA
AYPELRALARTLTGHVVVLDGEIVAMDGQGRSDFGLLQRRMKLTKPREIAAVSIEVPVQL
LVFDILHLDGISLLRKTYDDRRRILTALAPGGGPVTVPEPLPGPARDALAHTVERRWEGI
IAKRAGSTYLPGRRSRTWIKIKNIIDQEIVVVGWRPGNGRRAGGIGGLLMAVPAKDGLEF
VGRVGTGFTDAALDDLQAMLEPLASPTSPLSHQLPRADALGVHWVRPELVGEVTYSEWTP
DHHLRHPVWRGLRPDRTVDDLT
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgacagtgcacaggtggtgatggacggccaccgattcgggctgaccaacctg
tccaaggtgctgtacccagcgacgggcaccaccaaggccgacgtcatcggctactacgcc
gaggtcgccgcggtgatgattccgttggtccagggtcggccggtgacccgtaagcgctgg
cccaacggggtcgggaccacaccgttcttccacaagaacgtcgaccgggggaccccgtcg
tggatccccacccgggagatcccgcactccgaccgcaccatcacctaccccctgatcgac
tcgccggccacgctggcctggctgggccagaacgccgcgctggaactgcatgtcccgcag
tggcgattcgccgacgacgggtcggtcggacggccggatcgggccgtgttcgacctggac
cccggtccgggggtcgatctggcccagtgcgccgaggtcgccagggccatccgccgccgc
ctgacggacctggagctgacggcctatccggtgacgagcggttccaaggggctgcacctc
tacgtcccgctaccgggaacccagacttcggaggaggtctcgcagttcgccaagctactg
gccgagaccgtcgagaaggacctcccggccctggtcgtgtccaggatgtccaaggtgctg
cgcgccgggaaggtgttcatcgactggtcgcagaacaacgcctcgaagaccaccatcgcg
ccgtactcgttgcgcggtcgggagttcccgacggttgcggccccgcggacctgggccgag
ctggaggacccgggcctcgcccacctggactaccgggaggtcatcgaacgggtcaggagc
gggctcgacccgttcggcgcggactccgcaggcgcgcagacggtgtccaacaggctggcc
gcctaccgctcgaagcggtcggccgaacggactcccgaaccggtccccccggccgatgca
aggcgcggcgcagcgaccggcacctccaccggtgacaccttcgtcatccaggagcaccat
gccaccgcactgcactgggacttccgtctggagcacgacggcgtgctggtctcgtgggcg
gtcccgaagggtattccgacctcctcgcagcacaaccggctggcggtgcagaccgaggac
caccccctggagtacgccgatttcgccggcaccatcgggcacggggagtacggcggggga
gaggtcaccatctgggactccggtcactaccgcctggagaagtggcgggacggcgaagtg
atcgtcatcctcgacggcgtgcgggccaccgggcggttcgcgctgatcaggaccaaacag
ggcgccggcgccggtgatgcggccaagggcaaccagtggctgatgcaccgcaccaaggac
cagccggacctggaaccggtggcgccgcaggagggccgcaaattcggctcggaccgcaag
atcgtgcaccgcctgccgccgaccgacctgctgcccatgttggcgagccccggcacgctc
gccgacgtcgtcggtgacgactggcgattcgaggggaagtgggacggggtcagggccgtc
gtcgagatcggtgagggacacttccggctggtcagccgcaacggcaacgacatcaccgcc
gcctatcccgaactgcgggcgctcgccaggacgttgaccggtcacgtggtcgtgctggac
ggcgagatcgtggcgatggatgggcagggccggtcggacttcggccttctgcagcgccgg
atgaagttgacgaaaccgcgtgagatcgccgcggtgtccatcgaagtgccggtgcagctc
ctggtcttcgacatcctgcacctggacgggatctccctactgcgcaagacctacgacgac
cgccgccggatactgaccgcgctggcgccgggcggtggtccggtgacggtgccggaaccg
ctgcccggcccggcccgggatgcgttggcgcacaccgtcgagcgcaggtgggaggggatc
atcgccaagagggccgggtcgacctatctgccgggtaggcggtcccgcacctggatcaag
atcaagaacatcatcgaccaggagatcgtcgtggtgggttggcgtccgggcaacgggcgt
cgggccggcggtatcggaggtctgctgatggcggtgcccgcgaaggacggcctcgagttc
gtcgggcgggtcggcactggtttcaccgacgcggcgctggacgatctgcaggcgatgctg
gagccgttggccagtccgacctcgcctctgtcacaccagctgccgagggccgacgcgctc
ggggtgcactgggtgcgaccggagctggtcggcgaggtgacgtactcggaatggaccccc
gaccaccacctgcgccacccggtctggcgcgggctccggccggatcggacggtggacgac
ctcacgtag
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