Nakamurella sp. PAMC28650: H7F38_23330
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Entry
H7F38_23330 CDS
T08954
Name
(GenBank) PKD domain-containing protein
Organism
naka
Nakamurella sp. PAMC28650
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_4
PKD
Laminin_G_3
Laminin_G_2
Rax2
Bact_surface_Ig-like
Laminin_G_1
DUF5122
REJ
Motif
Other DBs
NCBI-ProteinID:
QNK80979
UniProt:
A0A7G8WKT6
LinkDB
All DBs
Position
complement(5148387..5153096)
Genome browser
AA seq
1569 aa
AA seq
DB search
MRKLSGLARRLSAMGTTVALVAAGLLVTVVAAVPAAAAPTAAAAISSGLSPTAPRTSNLA
TADALPTVQIDGVAWSQAIVGSSVWVVGGFANARPAGSAAGSNNVARNNILVYTLSTGNL
VTSIVPYLNAPGYVVAASPDGTRVYVGGDFTSANGQTHQRIAAYNASTGAIIGTFTASVD
ARVKSIVATNTTVYVGGSFQNANGTPRAYVAAFTAATGALTSWNPGADSHVAAMVMAPDQ
SKLIIGGQFQNVGGLPNYGMAAVDPVNGGVLPWNATQKVRDAGANASILGLTTDGTYIYG
NGYVFGSGGNLEGTFQADMDGNVQWIEDCHGDTYGNFVTNNTVYTVSHAHYCGNIGGFPQ
TNPWTPHRSLAFTTNATGTIGHDPYGYFDWFGNVSPSIVDWFPNLVQGTYTGQGQAAWTI
TGNSQYIIEGGEFPSVNGVAQQGLVRFAVGTPNKVGPEASQPTLVTSVVSLSAGTARVAW
QTTNDRDDLALTYKVVRDGKTATPIYTTTANSTFWNQPSIGFTDTGLAPGSTHSYRVYAY
DPAGNSAVGSTKTVTIATAGANSAFANDVISAGASHFWRLGESSGTVGYDWAAYDDLTLN
SAVTRVGGGSQPEDTSAAAFDGSSGFAVNGSAVQAPDTFTEAAWFQTTSTSGGKILGYGN
ATTGNSSSYDRHIYMDAAGHLYFGVYTGALVTISTTGTFNDGQWHQVVGSMSSAGMAFYV
DGKRVGTTSTTVGQSYVGYWRVGGDSSWNDNPYLAGTIDEVAIYPSALSLAQVRQQFVDS
GRSLPGATAPADPYGAAVYNSSPDVFYRMDETSGTSATDLSGNSNAGVYSGGETFGTASN
VGAPTGTAVTFNGIDGTLSSTNQVNAPSVYSEEAWFNTSTTHGGKIIGFGDQQKGNSGNY
DRHIYMLNNGQLVFGTYTGTLNLAQTAGSYNDSKWHHVVATQGADGMKLYVDSVLVATNV
QTQAQGYAGYWRVGGDSDWGGDSPYFAGAIDEAAAYSVELTSAQVSAHYNASAAANKAPT
ASFTSTATNLSVAFNGSASADPDGTIASYSWDFGDSTSSTAVSPTHLYTAAGTYTVVLTV
TDNQGATGTKSVTITVTTPPNVAPTASFTSTATNLSVAFNGSASADPDGTIASYSWDFGD
STSSTAVSPTHLYTAAGTYTVVLTVTDNQGATGTKSVTITVTTPPNVAPTASFTSTATNL
SVAFNGSASADPDGTIASYSWDFGDSTSSTAVSPTHLYTAAGTYTVVLTVTDNQGATGTK
SATITVTTAANQSPIAAFTSTFNGLSPTFDGTSSNDPDGTIASYAWTFGDSTTGTGPSIT
HNYTAAGTYSVGLTVTDNLGATNTKTASVVVSLPAPFVTDAFGRTSTSGWGTANLGGNWT
SVGTAANITVNGSVGKIVSPTAGASAGTYLGATARTSTDLTATVAADKVGTGGGTYVYVV
GRRVSTNNEYRARVRFAGGGKVGIALTSLKGSSTDVTLATEVLLTGTFAANQVFNVRFDV
VGTGTTTLKLKVWAAGTAEPAAWQLSSSDGFAGLQAAGAVGFTTYVSSSSTNAPVTVSIG
SLNARPAGA
NT seq
4710 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaagttatccggattggcgcggaggttgtcggcaatggggacgactgtcgcactg
gttgccgccggtctgctggtgaccgtggtcgccgccgtgccagcagcagcggcccccact
gcggcggcagcgatctcttcgggcctgagtccgaccgctccgcgcaccagcaatctggca
acggcggacgcccttcccaccgttcagatcgacggagttgcctggtcgcaggcgatcgtc
ggcagttccgtctgggtagtcggcggattcgcgaacgcccgcccggcgggctcagcagca
ggctcgaacaatgtggcgcgcaacaacatcctcgtctacacgctttcgaccggcaatctg
gtcacctcgatcgttccctatctgaacgcaccaggttacgtcgtcgccgcctcgcccgac
gggacgagggtctacgtcggcggtgatttcacttccgccaacggccagacccaccagcgg
atagccgcatacaacgcgtccacgggtgcgatcatcggcacgttcaccgcctcggtggac
gccagggtgaagtccatcgtcgccaccaacactacggtgtacgtcgggggatcgtttcag
aacgcaaatggaacaccgcgcgcctacgtggctgctttcacagccgcgaccggcgccctc
acctcgtggaacccgggtgcggactcccacgtggccgcgatggtcatggcgccggaccag
tccaagctgatcatcggcggtcagttccagaacgtcggcgggttgcccaactacggcatg
gctgcagtggacccggtgaatggaggggttctcccatggaacgccacccagaaggtgcgc
gatgccggcgcgaacgcgtccattctcggtctgacgaccgatggcacctacatctacggc
aatgggtatgtcttcgggtccggcggcaatcttgagggcacgttccaagctgacatggac
ggcaacgtgcagtggatcgaagactgccacggagacacgtacggcaacttcgtcaccaac
aacactgtctacaccgtcagccacgctcactactgcggcaatatcggcggctttccccag
acaaatccttggacaccgcatcgttcgttggctttcacaacaaacgcgacgggcaccatc
ggacacgatccctacggctacttcgactggttcggcaacgtcagcccgtccatcgtcgac
tggtttccgaacctggtgcagggtacctatacaggtcaaggacaggccgcttggacgatc
acgggcaacagtcaatacatcattgaaggtggggagtttccgtcggtgaacggagtagcc
caacagggtctcgtgaggttcgctgtgggtacacccaacaaagttggaccggaagcgtct
caaccgaccctggtgacctcggtggtttctctcagcgcggggacggcgcgcgtcgcttgg
cagaccaccaacgaccgtgatgacctcgcgctcacctacaaggtggtccgggacggaaag
actgcgaccccgatctacaccaccacggcgaactcgacattctggaaccagcccagcatc
ggtttcaccgatacgggcctggctccgggctcaacgcacagctaccgggtctacgcctat
gaccctgcgggtaattcggctgtcggaagcacgaagaccgtcaccattgcaacggctggt
gcgaacagtgcctttgccaacgacgtcatctcggccggggccagccacttctggagattg
ggtgagagttccggaactgtgggatacgactgggccgcctacgacgacctcaccctcaac
agcgccgtcaccagggtgggcggtggatcgcaaccggaggacaccagtgctgcagctttc
gacggttcgtccgggttcgctgtgaacggctctgccgttcaggcgcccgacacctttacc
gaagctgcatggttccagacgacctcgacctccggcggaaagatcctcggatacgggaac
gctacgacgggcaacagttccagctacgaccgccacatctacatggacgcagcaggacat
ctctacttcggtgtctacaccggcgcgttggttaccatcagcacgaccgggacgttcaac
gacggacagtggcatcaggtggtcgggtccatgtcgagcgccgggatggccttctacgtc
gacggcaagcgtgtcggtacgacgtccacgacggtcggtcagtcctacgtgggttactgg
cgggtcgggggggacagttcgtggaatgacaacccctacctggcgggcaccatcgatgag
gtcgccatctacccgagcgctcttagcctggcccaggttcgccagcagttcgtcgactcg
gggcggtccctgccaggggccaccgctcccgccgatccctatggcgcggcggtctacaac
tcatcgcccgatgtcttttaccggatggacgagacctctgggacgtccgcgaccgacctt
tccggcaacagcaatgccggtgtgtacagcggtggcgagaccttcggtactgcaagtaat
gtcggcgcaccgacggggacggcagtcactttcaacggtatcgacggcacgttgagctcg
acgaaccaggtgaatgctccttcggtctacagcgaagaggcgtggttcaacacgtccacc
acgcacggcggaaaaatcatcggcttcggcgatcagcaaaagggcaacagcggcaactat
gaccgccacatctacatgctcaacaatgggcaactggtcttcggtacctacaccgggaca
ctgaacctcgcccagaccgccggcagttacaacgacagcaagtggcaccacgtcgtcgcg
acccagggtgcggacggcatgaagttgtacgttgacagcgttcttgttgccaccaatgtc
cagacccaggcacagggatacgctggctactggagagtcggcggcgacagcgactggggc
ggcgacagcccttacttcgccggtgcgatcgacgaagcggctgcctactcggtggagttg
acctccgctcaggtttcggcccactacaacgcttcggccgcggccaacaaagctcccact
gcgtcgttcacgtcgactgcgacgaatttgagtgttgcgttcaacggatcggcttcggct
gatccggacggcacgatcgcctcgtacagctgggatttcggtgattcgaccagcagtacg
gcggtgagcccgacgcatctgtacacggcggctggtacctacaccgtggtgttgacggtg
accgacaaccagggtgccacgggtaccaagagcgtaacgatcaccgtcacgacaccgccg
aatgttgctccgactgcgtcgttcacgtcgactgcgacgaatttgagtgttgcgttcaac
gggtcggcttcggctgatccggacggcacgatcgcctcgtacagctgggatttcggtgat
tcgaccagcagtacggcggtgagcccgacgcatctgtacacggcggctggtacctacacc
gtggtgttgacggtgaccgacaaccagggtgccacgggtaccaagagcgtaacgatcacc
gtcacgacaccgccgaatgttgctccgactgcgtcgttcacgtcgactgcgacgaatttg
agtgttgcgttcaacgggtcggcttcggctgatccggacggcacgatcgcctcgtacagc
tgggatttcggtgattcgaccagcagtacggcggtgagcccgacgcatctgtacacggcg
gctggtacctacaccgtggtgttgacggtgaccgacaaccagggtgccacgggtaccaag
agcgcgacgatcaccgtcacgacggcagcaaaccagagtccgatcgctgcgttcacttcc
acgttcaacggtctgagcccgactttcgacgggaccagttcgaatgatccggacggcacc
attgcttcgtatgcatggaccttcggagattcgaccactgggaccggaccgtcgatcact
cataactacacggcggctggtacctacagtgtcggtctcacggtgaccgacaatcttggg
gctaccaacaccaagacggcgagtgtcgtggtcagcctgcctgcaccgttcgtgacggat
gccttcggccgcacctcgacgtccggctggggaaccgccaacctcggtgggaactggacc
tcggtcggaactgctgccaacatcacggtcaacggatccgtaggcaagatcgtgtccccc
acggcgggtgcgtctgcagggacctatctcggagcgaccgccaggaccagcaccgatctg
accgccacggtcgcggcggacaaggtcggtacgggtggcggtacctacgtgtacgtggtc
ggtcgtcgggtctcgaccaacaacgagtaccgcgcacgtgtgcggttcgccggcggcggc
aaggtgggtatcgcgctgacctcgctcaagggttcgagcacggacgtcacacttgccacc
gaggtcttgttgaccgggacgttcgctgcgaaccaggtcttcaacgtccggttcgacgtt
gtcgggacgggcaccaccaccctgaagctgaaggtgtgggcggccggtaccgccgagccg
gcagcgtggcagctcagctcctccgatgggttcgccggtctgcaggccgccggcgcggtc
gggttcacgacctacgtgtccagcagctcgacgaacgctcctgtgacggtctccatcggt
tcgctcaacgcccgaccggcaggcgcgtga
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