Candidatus Nitrospira allomarina: PP769_07355
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Entry
PP769_07355 CDS
T09427
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PP769_07355 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nall03400
]
PP769_07355 (uvrB)
DNA repair and recombination proteins [BR:
nall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PP769_07355 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PP769_07355 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
SWI2_SNF2
Kinesin
AAA_30
UB2H
AAA_22
Microtub_bd
DUF87
Motif
Other DBs
NCBI-ProteinID:
WNM59566
UniProt:
A0AA96JXX0
LinkDB
All DBs
Position
1659349..1661358
Genome browser
AA seq
669 aa
AA seq
DB search
MMQATNTFSLKSDYTPKGDQGNAIAALTDGLEQGLKHQVLLGVTGSGKTFTMANVIVNVQ
KPTLVVVHNKTLAAQLYQEFKSFFPDNAVEYFVSYYDYYQPEAYIPTTDTYIAKDSAIND
TIDQMRHAATTALLQRNDIIIVASVSCIYGLGSPEVYHDMLLYLEPGMEMRRERILAKLV
DIQYSRNDLELQRGMFRARGDVIEIYPASSDSNTVRVELFGDEVEALYEIDPLTGQSLRK
LPKIAIYPKSHYVIAPDRYEQAITGIESELEERIAYFRRTNQLLEAQRIEQRTRFDLEMI
RTMGYCHGIENYSRHLSGRAPGEPPPTLLDYFPKDFLLIVDESHATVPQFGGMYEGDRSR
KNTLVEYGFRLPSAMDNRPLKFPEFERCMNQVVYVSATPGPYELKHAGKALVEQIIRPTG
LIDPVMDVKPAKGQVEQLLGEIRLRVAKGQRVLVTTLTKRMAEDLTEYYHDQGLKVRYLH
SDIKTLERADIIRDLRKGVFDVLVGINLLREGLDLPEVSLVAVLDADKEGFLRGYRALVQ
TAGRAARHREGTVILYGDVVTDSMRRALDETGRRRTIQLAYNDEHGITPETIVKRIHDLE
YQLAEADYVDVSLAAEAVAAYGGEKDLEQNIAALEKDMKAAAKALEFERAAQLRDTLRVL
RQKQIQVGI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaagcgaccaacaccttttctctcaagtccgattacacacccaaaggtgatcaa
gggaatgcgattgccgcgttgactgatggcttagaacaagggcttaagcatcaagtgttg
ttgggggtcacgggttcggggaagacgttcaccatggccaacgtgatcgtcaacgtgcaa
aaacctacattggtcgtggtccacaataagacgttggcggctcagttgtatcaggagttt
aaatcattttttcccgataatgcggtcgaatattttgtgagctattacgactactatcag
ccggaagcctatattccgactacggatacctatatcgctaaagactccgccatcaacgac
accatcgatcagatgcgccatgcggctacgacagcgctcctgcaacgcaatgacattatt
attgtggcgtccgtgtcgtgtatttatggcctgggatcgcctgaggtctatcacgacatg
ttgttgtatctggagccgggcatggagatgcgccgggagcgcattctggccaagctggtg
gatattcaatattcgcggaatgatctcgagttgcaacgtgggatgtttcgggcgcggggg
gatgtcattgagatatatcccgcttcgtccgattcgaatacggtccgggtggaattgttc
ggcgacgaagtggaagccctgtatgaaatcgatccgttgaccggccagtcgttgcggaag
ctcccaaaaattgcgatctatcccaagagccactatgtgattgcgcccgatcgctatgag
caggccattaccggcattgaatcagagctggaagaacgcattgcctactttcgccggaca
aatcaattgctggaagcgcaacggattgaacaacggacgagatttgatctggagatgatt
cgaacgatggggtattgccatggaattgagaactattcccgtcacctgagcggacgggcg
ccgggcgagcctccgccgaccctgttggattatttccccaaagactttttgctgattgta
gacgaatcgcatgccaccgttccgcaattcggcgggatgtacgagggagaccgttcacgc
aaaaacaccttggtcgagtacgggtttcggttaccctcggcgatggataaccggcccctt
aaatttcccgaatttgaaaggtgcatgaatcaggtggtgtatgtttccgcgactccggga
ccgtatgaactgaaacatgccggcaaggcgctggttgagcaaatcattcgacccacaggt
ttaattgatccggtgatggacgtgaagccggcgaagggccaggtcgaacagctgcttggg
gaaatccggctgcgagtggcgaaggggcagcgggtgctggtgacgacgttgaccaagcgc
atggcggaagatcttaccgagtattatcacgaccaggggttaaaggtgcgctatctgcat
tcggatattaaaacgcttgagcgggcggacatcatcagggatctgcgtaagggtgtgttt
gatgtgctggtcggcattaatttattgcgtgaaggattggatttgccggaagtcagttta
gtggcggtgctggatgcggataaggaaggtttcctaagaggatatcgtgccttagtccag
acagccgggcgcgcggcacgtcatcgcgaaggcactgtgattttgtatggcgatgtggtc
accgattcgatgcggagggcgttggacgaaaccggtcgccgacgaaccattcaattggca
tacaacgacgagcatgggatcacaccggaaacgatcgtaaaacgcatccacgatttggag
taccaactggcggaagccgattatgtggatgtctcgcttgcggcagaagcggttgcggcg
tacgggggcgaaaaagatttagaacagaatatcgccgcattggaaaaagatatgaaggcg
gcagccaaggccttggaatttgaacgagccgcccagttgcgggatacccttcgtgttctc
cgccaaaagcagattcaggtcggaatttaa
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integrated database retrieval system
