Candidatus Nitrospira allomarina: PP769_19585
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Entry
PP769_19585 CDS
T09427
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nall
Candidatus Nitrospira allomarina
Pathway
nall00521
Streptomycin biosynthesis
nall00523
Polyketide sugar unit biosynthesis
nall00541
O-Antigen nucleotide sugar biosynthesis
nall01100
Metabolic pathways
nall01110
Biosynthesis of secondary metabolites
nall01250
Biosynthesis of nucleotide sugars
Module
nall_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
nall00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PP769_19585 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PP769_19585 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PP769_19585 (rfbC)
Enzymes [BR:
nall01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PP769_19585 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
FdtA
Motif
Other DBs
NCBI-ProteinID:
WNM58146
UniProt:
A0AA96GAU9
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All DBs
Position
complement(4511810..4512349)
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AA seq
179 aa
AA seq
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MIFTESPLKGAFLIDPEKVEDSRGFFARTWCRREFERHGISFQPVQCNVSFNKIKGVLRG
MHYQSAPHQEAKLIWCIKGAIHDVIIDLRPYSSTFTKHVAVVLSEENRRMLYIPEGFAHG
FQTLQNESEIFYQMSEFYAPEFAKGVRWNDPSFGIQWPTDDRIISGRDQSYPDFNLTKD
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgattttcacggagtcaccactcaagggggccttccttattgatccggaaaaggtagaa
gactccagaggcttttttgcacgaacgtggtgccggcgggaatttgagcgacacggtatc
tcctttcaacccgttcagtgcaatgtatcgtttaataaaattaaaggggttcttcgagga
atgcattatcaatcggctcctcatcaagaagccaagctcatctggtgtattaagggtgcg
attcacgatgtaattattgacttgcgtccatattcttcaactttcacgaaacatgtggca
gttgtcctcagcgaagaaaaccgccggatgttatacattccagaagggtttgctcatggg
tttcagactttacaaaatgagtcggaaattttttaccagatgtctgagttttacgctcct
gaatttgccaaaggggtaaggtggaatgatccttcatttggaattcaatggcccacggat
gatcgcatcatatccggtcgtgatcagagttatcctgacttcaacctcacaaaggactaa
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