Nocardioides anomalus: G5V58_14625
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Entry
G5V58_14625 CDS
T07000
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nano
Nocardioides anomalus
Pathway
nano03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nano00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G5V58_14625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nano03021
]
G5V58_14625
03019 Messenger RNA biogenesis [BR:
nano03019
]
G5V58_14625
Transcription machinery [BR:
nano03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G5V58_14625
Messenger RNA biogenesis [BR:
nano03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G5V58_14625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Motif
Other DBs
NCBI-ProteinID:
QIG45989
UniProt:
A0A6G6WL71
LinkDB
All DBs
Position
complement(2900922..2902709)
Genome browser
AA seq
595 aa
AA seq
DB search
MLLADLKSMAGGLGIKGSGSMKKAQLVDAIKAAQAQPALPTETREQPRRAEVKAEPQPER
RERQPERQPERQERQERQERQERQERQERQPERQERQRDQQKDQQKDQQKDQQAQRDQQA
QRDRQQSRPQRDQQGNQQGNQQRDQQRDGQQQRDQQRDQQRDGQQQRDQQRDQQRNQPQQ
SQREPEPVDADDEDGEGGRRSRRRRGRDRDRTRQPGSRSEPDTTILDDDVLVPAAGILDV
LDNYAFVRTSGYLPGVDDVYLSLSMVRRYGLRRGDAVVGQVRQPREGERKEKFNPMVRID
AVNGADPDAAKNRVDFTTATPVHPRERLRLETGADDVVGRVLDLAAPVGKGQRGLIVAPA
RSGRTTILQAVAAAVTANSPEAHLMVVLVDERPEEVTDFQRSVKGEVIASTFDRPPADHT
TVAELAIERAKRLVELGHDVVVLLDGLTRLGRAYNLTASTGGRTLAGGVDAASLYPTKRF
FGAARTLEDGGSLTVLATALVDSGSAVDELLVEELTGTENLLLRLSGDLAEARVFPAVDL
AQSGTRHEAALLGTRAAALDRLRTRLAAKTPEEALRELLDRIARTGSNDELLASV
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgctgctcgccgacctgaagtcgatggccggcggcctcggcatcaagggctccgggtcg
atgaagaaggcccagctcgtcgacgccatcaaggccgcccaggcccagccggcgctgccc
accgagacgcgcgagcagccgcgtcgcgccgaggtcaaggccgagccccagcccgagcgc
cgggagcgccagcccgagcggcagccggagcggcaggagcgccaggagcggcaggagcgc
caggagcggcaggagcgccaggagcggcagcccgagcgccaggagcggcagcgggaccag
cagaaggaccagcagaaggatcagcagaaggaccagcaggcccagcgcgaccagcaggcc
cagcgcgaccgccagcagagccgcccgcagcgggaccagcagggcaaccagcagggcaac
cagcagcgggaccagcagcgcgacggccagcagcagcgggaccagcagcgggaccagcag
cgcgacggccagcagcagcgggaccagcagcgggaccagcagcgcaaccagccgcagcag
tcccagcgcgagccggagccggtcgacgcggacgacgaggacggcgagggcgggcgccgc
agccggcgccgccggggccgcgaccgcgaccgcacccgccagcccgggagccgcagcgag
ccggacaccacgatcctcgacgacgacgtcctggtgccggcggcggggatcctcgacgtg
ctcgacaactacgcgttcgtgcggaccagcggctacctgccgggcgtcgacgacgtgtac
ctctcgctgtcgatggtgcgccgctacggcctgcgccggggcgacgcggtcgtgggccag
gtgcgccagccgcgcgagggggagcgcaaggagaagttcaacccgatggtccgcatcgac
gcggtcaacggcgcggaccccgacgcggccaagaaccgcgtcgacttcaccaccgcgacg
ccggtgcacccgcgcgagcggctgcggctggagacgggcgcggacgacgtggtcggccgg
gtgctcgacctggccgcgccggtgggcaagggccagcgcgggctgatcgtggcgccggcg
cgctcgggccggacgacgatcctgcaggccgtcgccgcggccgtgaccgccaacagcccc
gaggcgcacctgatggtcgtgctcgtcgacgagcggcccgaggaggtcaccgacttccag
cgcagcgtcaagggcgaggtcatcgcctcgacgttcgaccgcccgccggccgaccacacc
acggtcgccgagctggccatcgagcgggccaagcggctcgtcgagctcggccacgacgtg
gtcgtgctgctggacgggctgacccggctcggccgcgcgtacaacctcaccgcctcgacc
gggggccgcaccctggccggcggcgtggacgcggcgtcgctgtacccgaccaagcgcttc
ttcggcgccgcccgcaccctcgaggacggcggctcgctgactgtcctggccaccgcgctg
gtcgacagcggctcggcggtcgacgagctgctggtcgaggagctcaccggcaccgagaac
ctcctgctgcggctcagcggcgacctggccgaggcccgggtcttcccggccgtggacctg
gcgcagtccggcacccggcacgaggcggcgctgctcggcacccgggcggcggcgctggac
cggctgcgcacccggctggccgcgaagacgcccgaggaggcgctgcgcgagctgctcgac
cggatcgccaggacgggctccaacgacgagctgctggcctccgtctag
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