Nitrospirillum viridazoti: Y958_09030
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Entry
Y958_09030 CDS
T04935
Name
(GenBank) RNA pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
nao
Nitrospirillum viridazoti
Brite
KEGG Orthology (KO) [BR:
nao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nao03009
]
Y958_09030
Enzymes [BR:
nao01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
Y958_09030
Ribosome biogenesis [BR:
nao03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Y958_09030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ASG20946
UniProt:
A0A248JQZ1
LinkDB
All DBs
Position
1:complement(1974344..1975357)
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AA seq
337 aa
AA seq
DB search
MSDEGGRKVETRTVTADEAEMRLDRWFKRHFPALRHIQLEKLLRTGQVRVDGGRVKGATR
LEAGQSVRIPPMPDLAPLAPGAVTRKERPVLSEKEVKALRDAVLYRDGDVIVLNKPAGLA
VQGGTGQNKHLDAMLDVLTFDGKERPKLVHRLDKDTSGCLVLARTSFAATRLAGYFRGKE
ARKYYWAVTVGVPKQYQGKIDAALAKEAGTRGERMAVDEDEGARAVTLYQVIENAHRQAA
FVALWPLTGRTHQLRAHMVAIGTPILGDGKYAGQEAFLPGGAELPRQLHLHARRIVIPNP
RGGKPIDVTANLPPHMAKTWEYFGFDMKDGDPFASYV
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgagggtggccgtaaggtcgagacgcggaccgtgaccgctgacgaggcggag
atgcgtctggaccgctggttcaagcggcatttcccggcgctgcgccatatccagctggaa
aagctgctgcgcaccggccaggtgcgggtggacggcggccgcgtcaagggcgccacgcgc
ctggaggccgggcagtccgtgcgcatcccccccatgcccgacctggcgcccctggcgccg
ggcgccgtgacgcgcaaggaacggccggtcctgtcggaaaaggaagtgaaggccctgcgc
gacgcggtgctgtaccgcgacggcgacgtcatcgtgctgaacaaacccgccggcctggcg
gtgcagggcggtaccggccagaacaagcacctggacgccatgctggacgtcctgaccttc
gacgggaaggagcggcccaagctggtccaccgcctggacaaggataccagcggctgtctg
gtgctggcccgcaccagtttcgccgccacccgcctggccggctatttccggggcaaggag
gcgcgcaagtactattgggccgtcaccgtgggtgtgcccaagcagtaccagggcaagatc
gacgccgccctggccaaggaagccggcacgcgcggcgagcgcatggcggtggacgaggat
gagggcgcgcgcgccgtcaccctgtaccaggtgatcgagaacgcgcaccggcaggccgcc
ttcgtcgccctgtggccgttgaccggccgcacccatcagctgcgcgcccacatggtggcc
atcggcacgcccatcctgggcgatggcaaatacgcggggcaggaggccttcctgcctggc
ggtgccgaactgccgcgccagttgcacctgcacgcccgccgcatcgtcatccccaacccg
cgcggcggcaaacccatcgacgtgacggccaacctgccgccgcacatggccaagacctgg
gaatatttcggcttcgatatgaaagacggcgatcctttcgccagctacgtctga
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