Nocardioides aquaticus: ENKNEFLB_00305
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Entry
ENKNEFLB_00305 CDS
T07580
Symbol
recC
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
naqu
Nocardioides aquaticus
Pathway
naqu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
naqu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ENKNEFLB_00305 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naqu03400
]
ENKNEFLB_00305 (recC)
Enzymes [BR:
naqu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ENKNEFLB_00305 (recC)
DNA repair and recombination proteins [BR:
naqu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ENKNEFLB_00305 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QVT77936
LinkDB
All DBs
Position
307642..311130
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AA seq
1162 aa
AA seq
DB search
MALHLHRAARTDALAAALGDLLAVAPADPFARDLVLVPAKGTERWLSQRLSHRLGSGPGS
ATGDGVCAAVDFRSPRSLVAELTDTVDDDPWAPGVLAWPLLEVLDASTDEPWARPLAVHL
GRDLDGEEAELRRSRRYAVARRLAGLLASYAAQRPDLLAAWSRGDDVDGVDRDGEPERAL
PGDLAWQPPLWRALTARVHEPTPAERHAATLTRLRSGPVAHLPARVSLLGHTRMPRAELE
LLVALADHHDLHLFWPHPSDELWRRLDARLGAGQVPRGPVPRRDDPAHNDAEHPLLATLG
RDVRELQRSLRSCAPTDLVEHVHEPLDGAPEGSRDGSPDGSPDGSPGSGGLLLSWLQSDL
RANEVRPAGRHHDPADRSMQVHACHGPARQVEVLREVLLGLLADDPTLEPRDILVMCPDI
ETYAPLVTAAFGLGVDADQAPPEPVGETEGSAPGRHPGHRLRVRLADRALVRTNPLLAVA
ASLLDLAGGRVTASLVLDLLQQPPVRRRFSLDDDDLEAVTDWVRESGVRWGLDSEQRAPY
GLAGFVQNTWRFGLDRVLAGVALSDDSRAWVGTTLPLDDVGSNRIDLAGRLAEYVDRLAV
ALEELTGPQSLATWLDALGRAVASLTRPERGETWQTGQVHRELAAVLADAGERAGVELRL
RDVRALLADHLAGRPTRANFRSGSLTVATMVPMRSVPHRVVCLVGLDDGVFPRQGAVDGD
DVLARTPLTGERDARSEDRQLLLDAIGATTGTLVVTFTGADEHTGRRRPPAVPLGELLDA
LDRTTVAPVREQVLVEHPLQPFDPRAAADGRLGTPGPFTFDPAVLAAARVMSRPRPEAPP
FLDGPLASPAGSGGPDVVDDVPLAALVSFLRDPVRGFFRALDVSLPWEADGVSDAMPVEI
GGLETWGVGNRMLEDMLRGTRPEAALAAEWRRGQLPPGRLGWRKAKDAAAQAEVIARAVH
VHRRGEARAHDVDVTLRSGRRVTGTVAPVHEGRLVARTYSKLSGKHLVEAWVRMLALASH
DPDKHWTSVVVGRAGGRGTGVREVLLGPPDEEPQSVLEDLVRLYDAGRREPLPLPVKTSY
AWATARHSHDDPVHAAGREWTSGRYPAEDAEPAHVRVWGPRAPLSVLLGEPRADEQVEGE
STRLGALAARLWLPLLRAEVRL
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccctccacctccaccgcgccgcgcgcaccgacgccctggccgccgcgctcggcgac
ctgctcgcggtcgcgccggccgacccgttcgcgcgggacctggtgctcgtcccggccaag
ggcaccgagcggtggctcagccagcggctctcgcaccggctcgggtccgggccgggcagc
gcgaccggcgacggcgtgtgcgccgcggtcgacttccgctcgccccgctcgctggtggcc
gagctgaccgacaccgtcgacgacgacccgtgggcgcccggcgtgctggcctggccgctg
ctcgaggtcctcgacgcgagcaccgacgagccgtgggcccggccgctcgccgtgcacctc
ggccgtgacctcgacggcgaggaggccgagctgcggcgcagccgccggtacgccgtggcc
cgccggctcgcgggcctgctcgcctcgtacgccgcgcagcgccccgacctgctcgccgcc
tggtcgcgcggcgacgacgtcgacggggtcgaccgcgacggggagcccgagcgcgccctg
cccggggacctcgcctggcagccgccgctgtggcgggcgctgaccgcgcgggtgcacgag
ccgaccccggcggagcggcacgccgcgacgctgacccggctgcggtcggggccggtggcc
cacctgcccgcgcgggtgagcctgctcggccacacccggatgccgcgcgccgagctcgag
ctgctcgtcgcgctcgccgaccaccacgacctccacctcttctggccgcaccccagcgac
gagctgtggcgccggctcgacgcccgcctgggcgccggccaggtgccacgcgggcccgtg
ccgcgccgcgacgaccccgcgcacaacgacgccgagcacccgctgctggccacgctaggc
cgcgacgtccgcgagctgcagcgcagcctgcgaagctgcgcgccgacggacctggtggag
cacgtgcacgagccgctcgacggggcgccggaggggtcgagggacgggtcgccggacggg
tcgccggacgggtcgccggggtccgggggcctgttgctgtcgtggctgcagtccgacctg
cgcgccaacgaggtccgcccggccggtcgccaccacgaccccgccgaccgcagcatgcag
gtgcacgcctgccacggtcccgcccggcaggtcgaggtgctgcgcgaggtcctgctcggc
ctgctggccgacgaccccacgctggagccccgcgacatcctcgtgatgtgcccggacatc
gagacctacgccccgctggtgacggcggcgttcgggctgggcgtggacgccgaccaggcc
ccgcccgagcccgtgggcgagaccgagggctcggctcccggacggcacccggggcaccgg
ctgcgggtccggctggccgaccgcgcgctggtgcggaccaacccgttgctggcggtggcg
gcctccctgctcgacctcgccggcggccgggtcacggccagcctggtgctcgacctgctc
cagcagcccccggtacgccgacggttctccctcgacgacgacgacctcgaggccgtgacc
gactgggtgcgcgagtccggcgtgcgctggggcctggactccgagcagcgggcgccgtac
ggcctggccgggttcgtgcagaacacctggcgcttcggcctcgaccgggtgctggccggg
gtggcgctctccgacgactcccgcgcctgggtcggcaccacgttgccgctcgacgacgtg
ggcagcaaccggatcgacctggccggacgcctggccgagtacgtcgaccggctcgccgtc
gcgctggaggagctcaccggcccgcagtcgctcgccacctggctggacgcgctggggcgg
gcggtggcctccctgacccggcccgagcgaggggagacctggcagaccgggcaggtgcac
cgcgagctcgcggcggtgctggccgacgccggcgagcgggccggcgtggagctgcggctg
cgcgacgtccgcgcgctgctggcggaccacctggccggccggccgacccgggccaacttc
cgcagcggcagcctgaccgtggccaccatggtgccgatgcggtcggtgccgcaccgggtc
gtgtgcctggtcggcctggacgacggcgttttcccgcggcagggcgcggtcgacggcgac
gacgtcctggcccgcaccccgctgacgggcgagcgcgacgcccgctccgaggaccggcag
ctgctcctggacgcgatcggggcgaccacgggcacgctcgtggtcaccttcaccggcgcc
gacgagcacaccggccggcgccgcccgcccgcggtcccgctgggcgagctcctcgacgcc
ctcgaccgcacaacggtggcgcccgtgcgcgagcaggtcctggtcgagcaccccctccag
ccgttcgacccccgcgcggccgccgacggccggctcggcacgccgggcccgttcaccttc
gacccggccgtgctcgcggccgcgcgggtgatgagccgaccgcgccccgaggcgccgccg
ttcctggacggaccgctggcctcgccggccggctccggcggacccgacgtggtcgacgac
gtgccgctcgccgcgctggtctccttcctgcgcgaccccgtgcggggcttcttccgtgcc
ctcgacgtcagccttccctgggaggccgacggcgtcagcgacgcgatgccggtggagatc
ggcggcctcgagacctggggcgtgggcaaccggatgctcgaggacatgctgcgcggcacc
cgccccgaggccgccctggccgccgagtggcgccgcggccagctgccgccgggccggctg
ggctggcgcaaggccaaggacgccgcggcccaggccgaggtgatcgcccgcgccgtccac
gtccaccgccgcggggaggcccgcgcccacgacgtggacgtgacgctgcgcagcgggcgc
cgggtcaccggcaccgtcgccccggtgcacgagggcaggctggtggcgcggacctactcc
aagctgtccggcaagcacctcgtcgaggcctgggtacgcatgctcgcgctggccagccac
gaccccgacaagcactggacctcggtggtcgtcggccgcgccggcggtcgggggaccggc
gtccgcgaggtcctgctcggcccgcccgacgaggagccccagtcggtcctcgaggacctc
gtccggctctacgacgccggccggcgcgagccgctgccgctgccggtgaagacgtcgtac
gcgtgggccaccgcgcggcacagccacgacgacccggtgcacgccgcgggccgcgagtgg
accagcggccgctatcccgcggaggacgccgagccggcccacgtgcgcgtgtggggtccc
cgagcgcccctgtcggtcctgctcggcgagccccgcgccgacgagcaggtcgagggcgag
agcacccggctcggcgccctggcggcccggctgtggctgcccctgctgcgggcggaggtg
cggctgtga
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