Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112400085
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Entry
112400085 CDS
T08872
Symbol
DDX41
Name
(RefSeq) probable ATP-dependent RNA helicase DDX41 isoform X1
KO
K13116
ATP-dependent RNA helicase DDX41 [EC:
5.6.2.7
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
112400085 (DDX41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nasi03041
]
112400085 (DDX41)
Enzymes [BR:
nasi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
112400085 (DDX41)
Spliceosome [BR:
nasi03041
]
Complex C
Other components
Complex C specific factors
112400085 (DDX41)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
zf-CCHC
ResIII
UTP25
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
112400085
NCBI-ProteinID:
XP_024601407
UniProt:
A0A341BI19
LinkDB
All DBs
Position
Unknown
AA seq
622 aa
AA seq
DB search
MEESEPERKRARTDEATATGSRSEADDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAE
EEQQDSGSEARGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEKILESV
AEGRALMSVKEMAKGITYDDPIKTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPI
KSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVI
MFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSPLLRCALCIGG
MSVKEQMETIRHGVHMMVATPGRLMDLLQKKMVSLDICRYLALDEADRMIDMGFEGDIRT
IFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAK
MVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFRE
GKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKAC
DESVLMDLKALLLEAKQKVPPVLQVLHCGDESMLDIGGERGCAFCGGLGHRITDCPKLEA
MQTKQVSNIGRKDYLAHSSMDF
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcggaacccgagcggaagcgggctcgcaccgacgaggcgactgccacagga
agccgctccgaggcagacgatgaggacgacgaggactacgtgccgtacgtgccgttgcga
cagcgccggcaactgctgctccagaagctgctgcagcgaagacgcaagggagctgcggaa
gaggagcagcaggacagcggcagcgaggcgcggggagatgaggacgacatcccgttgggc
cctcagtccaacgtcagcctcctggatcagcaccagcacctcaaagagaaggctgaagcc
cgcaaggagtctgccaaagagaagcaactaaaggaagaggagaagatcctggagagtgtg
gctgagggtcgagccttgatgtcagtgaaggagatggctaagggaatcacgtatgacgat
ccaatcaaaactagttggacaccaccccgttacgtcctgagcatgtctgaagagcggcat
gagcgtgtacggaagaagtaccacatcttggtggaaggagatggtatcccaccacccatc
aagagcttcaaggaaatgaaatttcctgcagccatcctgagaggcctgaagaagaagggc
atccaccacccgacacccattcagatccagggaattcccaccattctgtctggccgtgac
atgataggcatagccttcacgggttcaggcaagacactggtgttcactttgccagtaatc
atgttctgcctggagcaagagaagaggttacctttctctaagcgtgaagggccctatgga
ctcattatctgcccctcgcgggagctggcccggcagacccacggcatcctggagtattac
tgccgcctgctgcaggaggacagctctccactcctgcgctgtgctctctgcatcgggggc
atgtccgtcaaagagcagatggagaccatccgacatggtgtgcacatgatggtggccacc
cctgggcgcctcatggatctgctacagaagaagatggtcagcctggatatctgtcgttac
ctggccctggacgaggctgaccgcatgatcgacatgggtttcgagggtgacatccgtacc
atcttctcctacttcaagggccagcgacagactctactctttagtgccaccatgcctaag
aagattcagaactttgccaagagcgccctggtaaagcctgtcacgatcaatgtggggcgt
gctggggctgccagcctggatgtcatccaggaagtggaatatgtgaaggaggaagccaag
atggtgtacctgcttgagtgcctgcagaagacaccgccgcccgtgctcatctttgcggag
aagaaagcagatgtggacgccatccatgagtacctgctcctcaagggggtcgaggctgtg
gccatccatgggggcaaagaccaagaggaacggaccaaggccatcgaggcattccgggag
ggcaagaaggatgtcctagtggccacagacgtagcctccaagggcttggacttccctgcc
atccagcacgtcatcaattatgacatgcctgaggagatcgagaactatgtgcaccgtatc
ggccgcactgggcgctcaggaaacacaggcattgccaccaccttcatcaacaaggcctgt
gatgagtcggtgctgatggatctcaaagccctgctgctggaggccaagcagaaggttcca
cccgtgctgcaagtactgcactgcggggacgagtccatgctggacattggaggagagcgt
ggctgcgccttctgtgggggcctgggccatcggatcaccgactgccccaaactcgaggct
atgcagacgaagcaggttagcaacatcggccgcaaggactacctggcccacagctccatg
gacttctga
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