Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112403451
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Entry
112403451 CDS
T08872
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nasi03000
]
112403451 (SOX13)
Transcription factors [BR:
nasi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
112403451 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
112403451
NCBI-ProteinID:
XP_024606656
UniProt:
A0A341BVE8
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MSMRSPGSAQLALDDVGTMVDCTVKSEGKKEPCHEAPQGLATAAEPQPGDPARAPQDGAD
PPAPAQDSSSLESNGSPEPKRPGGSEAASGSQEKLDFNRNLKEVVPAIEKLLSSDWKERF
LGRSCVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQ
MELARQQQEQQINMPYVMIPAFPPSHQPLPVTPDSQLALPIQPIPCKPVEYPLQLLHSPA
TPVVKRPGALSAHHALQEPSQPLNLTAKPKAPELPNASSSPSLKMSNCGPRPPSHGAPTR
DLQASPPSLPLGFLGEGDAVTKAIQDARQLLHGHSGALESPPNTSFRKDLISLDTSPAKE
RLEESCVHPLEEAMLGCDVDGSRHFPESRNSSHIKRPMNAFMVWAKDERRKILQAFPDMH
NSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRV
GEYKALMRTRRQDARQSYTTPPQASQVQMSPSDVLYPRVAGVPLAQPLVEHYVPRSLDPN
MPVIVNTCSLREEGEGTEDRHSVADGEMYRYSEDEDSEAEEKSDGELVVLTD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgagaagccccggctctgcccagctggccctggatgacgttggcaccatggtg
gactgtactgtcaagtcagaggggaagaaggaaccctgccacgaggccccccagggcttg
gccaccgcagctgaaccccagcccggagatccagcccgggccccccaggatggtgctgac
cctccagctccagcccaggacagcagctccctggaaagcaacgggtccccagaacccaag
agaccaggaggctctgaggctgcttctggaagccaggagaagctggacttcaaccgaaat
ttaaaagaagtcgtgccggccatcgagaagctgctgtccagtgactggaaggagaggttt
ctgggaaggagctgtgtggaaaccaaagatgtcaaagggacccaggagagcctggcagag
aaggagctccagctgctggtcatgatccatcagctgtccaccctgcgggaccagctgctg
acggcccactccgagcagaagaacatggccgctatgctctttgagaagcagcagcagcag
atggagctggcccggcagcagcaggagcagcagatcaacatgccttacgtcatgattcca
gccttccccccaagccaccagcctctgcctgtcacccccgactcccagctggctttgccc
attcagcccattccctgcaagccagtggagtacccgctgcagctgctgcacagccccgcc
accccagtggtgaagaggcctggggccttgtctgcccaccacgccctacaggagccctcc
caacccctaaacctcacggccaagcccaaggcccccgagctgcctaatgcctccagctcc
ccgagcctgaagatgagcaactgtggaccccgtcctcccagccacggggcccccacacgg
gacctgcaggccagcccccccagcctgcctttgggcttccttggtgaaggggatgctgtc
accaaagccatccaggatgccagacagctgctgcacggtcacagtggagccttagaaagt
ccccccaacacttccttccgtaaggacctcattagcctggacacatccccagccaaggag
cggctggaggagagctgtgtgcacccactggaagaagccatgctgggctgtgacgtggac
ggctcccgccacttccctgagtcccggaacagcagccacatcaagaggcccatgaatgcc
ttcatggtgtgggccaaggatgagaggaggaagatcctccaggccttcccagacatgcac
aattccagcatcagcaagatccttggctcccgctggaagtccatgaccaaccaggagaag
cagccttactacgaggagcaggcaaggctgagccggcagcacctggagaagtaccctgac
tacaagtacaagccacggcccaagcgcacctgcatcgtggagggcaagcggctgcgggtg
ggcgagtataaggccctgatgaggacccggcgccaggatgcccgccagagctacacgacc
cccccgcaggccagccaggtgcagatgagcccctcagacgtcctgtaccctcgggtggca
ggcgtgcccctggcacagcccctggtggagcactacgtgccccgcagcctggacccaaac
atgcctgtcatcgtcaacacctgcagcctcagggaggagggtgagggcacagaggacagg
cactcggtggctgatggcgagatgtaccggtacagcgaggatgaggactcagaggccgag
gagaagagcgacggggaactggtggtactcacagactga
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