Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112408299
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Entry
112408299 CDS
T08872
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi03013
Nucleocytoplasmic transport
nasi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
112408299 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
112408299 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nasi03019
]
112408299 (THOC1)
03041 Spliceosome [BR:
nasi03041
]
112408299 (THOC1)
Messenger RNA biogenesis [BR:
nasi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
112408299 (THOC1)
Spliceosome [BR:
nasi03041
]
Complex C
Other components
EJC/TREX
112408299 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
112408299 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
HsdM_N
Motif
Other DBs
NCBI-GeneID:
112408299
NCBI-ProteinID:
XP_024613663
UniProt:
A0A341CGK6
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MSPTPPLFSLPEARTRFTKSTREALNNKNIKPLLNTFSQLPGSENEKKCTLDQAFRGVVE
EEIINHSSCENVLAVISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCDTIFTFVEKNV
ATWKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQ
FNLENVTVFNTNEQESTLGQKHMEDREEGMDVEEGEMGDDEAPTTCSIPIDYNLYRKFWS
LQDYFRNPVQCYEKISWKTFLKYSEEVLAVFKSYKLDDTQASRKKMEELKTGGEHVYFAK
FLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKSV
YQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERTSDTKPTRVVRKRTAPE
DFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSETREYMPTLEEFFEEAIEQADPENMV
ENEYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEI
KTGEDEDEEDNDALLKENESPDVRRDKPVTGDQIEVFANKLGEQWKILAPYLEMKDSEIR
QIECDSEDMKMRAKQLLVAWQDQEGVHATPENLINALNKSGLSDLAESLTNDNETNS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctacgccgccgctcttcagtttgcccgaagcgcggacgcggtttacgaaatct
accagagaggccctgaacaacaaaaatatcaagcccttgttgaataccttcagccagttg
cctggaagtgaaaatgaaaaaaaatgtacccttgaccaagcttttagaggtgttgtagaa
gaagaaattataaatcattcatcatgtgaaaacgttttagctgttatttctcttgctatt
gggggagttactgaaggtatttgtacagcatctacaccttttgtattgttgggagatgtt
ttggattgccttcctttggatcagtgtgacacgatattcacttttgtggaaaaaaatgtt
gctacttggaaatcaaatacattctattctgctgggaaaaattatttactacgtatgtgc
aatgatctcttacgaagattatcaaaatcccagaatacagtcttctgtggacgaattcag
ctctttttggccagacttttccctttatctgagaagtcaggtcttaacttgcagagtcag
tttaatctggaaaatgtcactgttttcaataccaatgagcaggaaagcacattgggtcaa
aagcacatggaggacagagaagaaggaatggatgtggaagaaggtgaaatgggggatgat
gaagctccaacaacttgctccattccaattgattacaacctgtaccgaaaattttggtca
cttcaggattactttaggaaccctgtgcaatgctatgagaaaatttcatggaaaactttt
ctcaagtattctgaagaagttctagctgtttttaagagttataaattagatgatactcag
gcctcaaggaaaaagatggaagaattgaaaacaggaggagagcatgtatattttgcaaag
tttttaacaagtgaaaagctgatggatttacaactgagcgacagtaactttcgtcgacac
atcctgttgcagtatctcattttattccagtatctcaaggggcaggtcaaatttaaaagt
tcaaactatgttttaactgatgagcaatcactctggattgaagatactacaaaatcagtt
tatcaactactatctgaaaatccccctgatggagaaagattttcaaagatggtagagcat
atattaaacactgaagaaaactggaactcatggaaaaatgaaggctgcccaagttttgtg
aaagaaagaacatcagataccaagccgacaagagtagtacggaagagaacggctccagag
gacttcctagggaaaggacccaacaaaaaaatcctgatgggaaatgaggagttaacaagg
ctttggaatctctgtcctgataatatggaagcctgtaaatcagagacaagggaatatatg
ccaactttggaggagttctttgaagaagccattgaacaggcagaccctgaaaatatggtt
gaaaatgaatacaaggctgtgaacaattctaattatggttggagagccctgagactatta
gcacggagaagccctcacttctttcagccaaccaaccagcagtttaaaagtttgccagaa
tatctcgaaaacatggtaataaagctagccaaggaattaccacctccttctgaagaaata
aaaacaggtgaggatgaagatgaggaagataatgatgctttactgaaggaaaatgaaagt
cctgatgttcggcgagacaaacctgtaacaggggaccaaatagaggtatttgccaacaaa
ctgggtgaacaatggaagattctggccccctacttggaaatgaaagactcagaaattaga
cagattgagtgtgacagtgaagacatgaagatgagagctaagcagctgctagtcgcctgg
caggatcaggagggagtgcacgcgacacctgagaacctgatcaatgcactcaacaagtct
gggttaagtgaccttgcagaaagtctaactaatgacaatgagacaaatagttag
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integrated database retrieval system
