Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112410084
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Entry
112410084 CDS
T08872
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Pathway
nasi04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
112410084 (FREM1)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Cadherin_4
Big_9
Lectin_C
Calx-beta
Motif
Other DBs
NCBI-GeneID:
112410084
NCBI-ProteinID:
XP_024616240
UniProt:
A0A341CN84
LinkDB
All DBs
Position
Unknown
AA seq
2175 aa
AA seq
DB search
MSSLRWGGLGALLLLLRLLPGWASPTLIRVNRGVRVMKGSSAFLSQDDLKFAIPKEKDVC
KVEVVMNEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDTVKLRLYRLTETDTFT
ETFILRVYLLEPDCNIIRMSDNVLEVSEFYGLSRAIDKNLLRFDYERTASLECTVRLDPV
GTRLPAHGQLVVVEPWPEEPRGDQPHSFFPESQLGTELKCPGGRCPLGLKKIGSLKVNCE
EFLLSGLRYQHLSPPSPHIDYISIRLDLTDSRSKIIYKSESVWLPVYIRAGIPNQIPRAA
FMAMFILEVDQFILTSLTTSVLDCEEDETPKPLLVFNITKAPLQGYVTHLWDHTRPVSSF
SWKDLSDMQIAYQPPNSSHSERRHYEVELEVYDFFFERSAPITVHISIRTADTNAPRVSW
NTGLNLLEGQSRAITWEQFQIVDNDDIHAVQVVIVDGLQHGQLTLRGGKGFLFTVADLQA
GVVQYHHDDSDSTKDFVVFRIFDGQHSIRHKFPINILPKDDSPPFLITNVVIELEEGQTI
LIQGSKLRASDMDSSDDYIFFNITKPPQAGEIMKKPAPGLIGYPVPGFLQMDLFNGIIYY
RHFGGEIFEDSFEFVLWDSHEPPNLSEPQVVTIHITPVDDQLPKEVPGVSRHLVVKETEV
AYITKKHLHFVDTESYDRELLYTVTTPPFFSSSRRHLDAGKLFMVDSIPRLTKNPAASGL
KSFTQHAVNYMKVAYMPPMQDIGPHPRHVQFAFSVSNQHGGTLFGICFNITILPVDNQVP
EVFTNPLRVAEGSQCVISTEHVLVSDVDTKLDNIHLSLQRQPQHGRVELNGFPLNTGAIF
SWGDLQALKVRYQHDGSEILQDDILLEVTDGINAAECVLYIEVLPVNDEPPVLKADLIPM
MHCSEGEEVVITSEYIFATDVDSDDMKLMFMIVREPQRGTVRKAGVTVRQFSQGDVMAGA
VTYKHTGGEIGLVPCFDTITLVVSDTEAGPFVNGPHPSVPRRESFPVYDLNITVYPVDNQ
SPSIAIGTMFFVDEGFSAALTVNHLSATDADTAADDLEFVLVAPPQFGYLENTLPSAGFE
KSNMGISIASFQWKDMKALHINYVQSRHLRMEPTADQFMVYVTDGKQRSLEIPFYIIINP
TNDEAPDFIVRNVTVCEGQMRELDSSIINAVDRDIPKDPLLFSVTQKPRHGLLINGVFSK
DLPQYKQSPNTGQKHELVYNFSMELLKNGMRLMYLHDDSESLADDFTIQLSDGKHKILKT
ISVEVTPVNDEKPVLSKKAEITVNMGETRIISSAVLSAIDEDSPREKIYYVFESLPQNGQ
LQLKIGRDWFPLHPGMKCTQEEVDLNLLRYTHTGAVDSQNRDSFTFYLWDGDNRSPAFNC
HITIKDMGKGDIVIRAKPLSVSKGDRGFLMTTTLLAVDGTGKPEELLYVITSPPRYGQVE
YVHYPGVPITSFSQMDIAGQRVCYVHKSTAAAHRDTFRFIVSNGLQTKPGVFEITLETVD
TALPVVTRNKGLRLAEGATGLLSPDLLQLTDPDTPAENLTFLLAQLPRHGQLYLRGTVPL
PHSFTQLDVDSGHVTYRHSGGHSRTDRFTFVATDGTNQGFLVDGRRWQEPVSFTIQVDQV
DKAAPHITHLHSPSQVGLLKNGCYGIYITSHVLKASDPDTDGNQIIFKILRGPQHGHLEN
TTTGEFIHEKFSQKDLNSKTVLYIINPSLEVNSDTIEFQVMDPMGNSATPQILELKWSHI
EWSQTEYEVCENVGVLPLEIIRKGYSMDSAFVSVKVNQVSATAGKDFTMTPSKLIQFDPG
MSTKMWNIAITYDGLEEDDEVFEVILNSPVNAVLGTKTKTAVKILDSKGGQCHPSYAFNA
NMPNAWEKGIWSLLSPGASSRTTSGSFHPERRPLPSSKQLAVAKGDTLRDFDSEDLSLMK
LRTQGNGKSVHPSSVYRNGTDIIYNYHGMISLKLEDDSSSTHKSKAKVSIVSHPQKTIKV
AELPQADKEESTTGSHFPQQDRLPSFPKNCTLELKGLFHFEESLQKLYKCNGIAWKSWSP
HTKVEDKSCPAGWHHHLGYCHSLITEQKGTWIIAAQACREHHLGSLVTVLSRQHMQWLWD
ISGRKPFWIGLNDQVHAGHWEWIGGEPVTFTNWRRGPPQRSKPGKNCVLVQRQGKWQTKD
CKKGRSHNYMCSRKL
NT seq
6528 nt
NT seq
+upstream
nt +downstream
nt
atgagctctctacgctggggtgggctcggtgccctgctgctgctgctcaggctgctcccg
ggctgggccagccccaccctcatccgtgttaaccgaggggtcagggtgatgaagggcagc
tccgccttcctgtctcaggatgacctgaagttcgccatccccaaagagaaagatgtctgc
aaagtggaagttgtgatgaatgaaccaataacccagagggttgggaaactcactccacag
gtctttgactgccatttccttcccaatgaagtaaagtatactcacaacggttgcccaatt
cttgatgaagacacagtgaagcttagactttacagattgactgagacagacaccttcacg
gaaacctttatcctgcgggtctatctcctggaaccagactgtaacatcatccgtatgagt
gacaatgtactggaggtgtctgaattctatggcctgtcccgagccattgataaaaacctg
ctcaggtttgattatgagaggacggctagtctggagtgtacagtcaggctggaccctgtg
ggaactcggctgccagctcatggccagctggttgtggtggagccctggccggaagaacct
cgtggagatcagccacacagttttttccctgagtctcaactgggaacagaactgaagtgt
cctggtggcagatgtcccctgggactgaagaaaataggaagtctcaaagtgaactgtgag
gagttcttgctgtcggggcttcgatatcaacatctgagtcccccttctccgcacattgat
tacatctccatccgactggacctcacagatagcaggagtaaaatcatatacaagtcagag
agtgtgtggttacccgtctatatcagagctggcatccctaatcagattccaagggctgca
ttcatggccatgtttattctggaagtggatcagttcatcctgacctctttgactacatca
gttctggactgtgaagaggatgagacccccaaacccttgctggtgttcaacattactaaa
gccccgctccaaggctatgtgactcatctgtgggatcacaccagaccggtgtcctccttc
agctggaaagacctaagtgacatgcaaattgcctatcagccaccaaacagcagccattct
gagaggagacattatgaggtggagttggaagtatatgacttcttctttgaaaggagtgca
cctattactgtccacatctccatcagaacagcagacacaaatgccccgagagtgtcctgg
aacacaggtctgaatctcctagagggacagtctcgggccatcacttgggaacagtttcag
attgttgacaatgatgacattcatgctgtccaggtagtcattgtggatggcctgcagcac
ggacagcttactctgagaggggggaagggctttctcttcaccgtggctgaccttcaggct
ggagtcgttcaatatcatcatgatgacagtgactccaccaaagactttgtggtcttcagg
atatttgacggccaacacagcatccgacataagtttcccatcaacatcttgcccaaagat
gatagtccaccattcctcataaccaatgttgtgattgaactggaggaggggcagaccata
ctgatccagggttccaagctgagagcttcagacatggactccagtgatgactacatcttc
tttaatatcacgaaacccccgcaggctggagagattatgaagaagccagcaccaggactg
ataggctatcctgtccctggcttccttcagatggatctgttcaatggcatcatttactat
cgtcattttggtggagaaatctttgaagattcatttgaatttgtcctgtgggacagccat
gaacctccaaatctctcagagccacaggtggtgacaatccatatcactccagtagatgac
cagcttccaaaagaggttcctggagtttctcgacatttggttgttaaggaaacggaggtg
gcctatatcactaagaaacatctacattttgtagatacagaatcatatgacagggagctg
ctctacacagtaaccactcctccatttttctcctctagccgcagacacttggatgctggg
aaattattcatggtagacagcataccaaggctaaccaaaaaccctgcagcttcagggttg
aagtcattcactcagcatgctgtgaactatatgaaagtggcctacatgccacccatgcaa
gatataggcccccacccccgacacgtccagtttgccttttccgtcagtaaccagcacggt
ggcactttgttcgggatctgctttaacatcacgattcttccggtggacaatcaggtccct
gaggtatttaccaaccctctgagagtggctgagggaagtcagtgtgtcatcagcacagag
catgtcctggtttctgacgtggacaccaaactggacaacatccacctctccctgcagaga
cagcctcagcatggaagggtggagctgaatggatttcctctaaacacaggggccatattt
tcttggggagacctccaggccttaaaagttaggtatcagcatgatggatctgagatactt
caggatgacatactactggaggtcacagatggcataaatgcagcagaatgtgtgctatac
attgaggtgttgcctgtaaatgatgagccaccggtcctaaaggcagacctcattcccatg
atgcactgctcagagggcgaagaggtggtcattacctctgaatacatttttgctactgat
gtggacagtgatgatatgaaactgatgttcatgattgttcgagaacctcagcgtgggaca
gtgaggaaagctggggtcacagtgcgtcagttttctcagggagatgttatggcaggggct
gtgacgtacaaacacacaggtggtgagattggcctggtgccttgttttgacaccataacg
ttggtagtttcggacacagaagctggcccttttgtgaatggacctcatccatctgttcct
cgtcgtgagtcctttccagtgtatgatctcaacatcacagtgtatccggtggacaaccaa
tcaccttcaattgcaataggtaccatgttctttgtagatgagggtttctcagcagccctt
actgttaaccatttgtctgccactgatgccgacactgcagcagatgacttggaatttgtt
ttggttgctcctccccagttcggctaccttgaaaacacattaccttctgcaggttttgaa
aaaagcaatatgggcatcagcatagcttcgtttcagtggaaagacatgaaggctttacac
attaactatgtgcagtccaggcatctgaggatggaaccaacagccgaccagttcatggtg
tatgtcactgatgggaaacaacgctccttggagataccattttacattataatcaacccc
acaaatgatgaagctcctgattttatagtgcggaatgttactgtgtgtgagggtcagatg
agagaactggattcttccatcattaatgctgttgaccgggacattcccaaggaccccttg
ctgttcagcgtcactcagaagccacgtcatggcctcctcatcaacggggtgtttagcaaa
gacttgcctcagtataagcaatcacccaacactggccagaagcatgaacttgtttacaac
ttttctatggaacttctcaagaatggaatgaggttgatgtatttgcatgatgactcagag
agccttgctgatgactttacaatccagttgtcagatgggaaacataagatacttaaaacc
atttctgtagaggtcaccccagttaatgatgagaaaccagtgctgagcaagaaagctgaa
attacagtgaatatgggtgaaactcgtattatttctagtgcagttctctcagccatagat
gaagactcccccagggagaagatttactacgtatttgaaagtcttccccaaaatgggcaa
cttcagcttaagatagggagggactggttccctctccatcctggcatgaaatgcactcag
gaagaagtggatctgaacttgctgagatacacacacacgggcgcagtggattcccagaac
cgagacagcttcaccttctacctctgggatggtgacaataggtcccctgcatttaattgt
cacatcaccatcaaggatatgggaaaaggtgatattgtcatccgggcaaaaccactttcg
gtgtctaaaggtgacagaggtttcctgatgaccaccaccctccttgctgtggacggaaca
ggcaagcctgaggaacttctctacgtcatcacctccccaccgcggtatggccaggtcgaa
tacgtccactatcctggggtccccattacaagcttcagccaaatggacatagcaggacag
agagtctgctacgtacataagagcacggcagctgcccacagagacacgttcagattcatc
gtgagcaatggactgcagaccaagcccggggtgtttgagatcacactggagactgtggac
acagccttacccgtggtgaccaggaacaaggggctgagactggctgaaggggccacgggc
ctcctctcccctgacctccttcagctgaccgaccctgacactccagcggagaacctcacc
ttccttttggcccagcttccacgacacggccagctctacctgcgggggacagtgccgctt
ccacacagtttcactcagctggacgtggacagcgggcatgtgacctacaggcactcagga
gggcactctcgcaccgaccgctttacttttgtggccacggatgggacaaaccaaggcttt
cttgtggatgggagaaggtggcaggaacctgtttcattcaccatccaggtggaccaggtg
gacaaagcagccccccacatcacacatttgcattccccttctcaagtggggctcctgaaa
aatggttgttatgggatttacatcacttcccacgtgttgaaggcatctgaccccgacact
gatggcaatcagatcatctttaagattttacgaggcccccaacatggacatctggagaat
acaacaacaggtgaatttatccatgagaaatttagccaaaaggacttaaacagtaagacc
gttctttacatcataaacccatctttggaagtaaattcagataccatagaatttcaagtc
atggaccccatggggaactctgccactcctcaaatcttggaactgaagtggtctcatatc
gagtggtcacagactgaatatgaggtctgtgagaatgtgggcgtattgcccttggaaatt
atcagaaagggatattccatggactcggcctttgtgagtgtaaaggttaaccaagtgtca
gctacagctggaaaggatttcactatgactccatctaagctgattcagtttgacccagga
atgtcaactaagatgtggaatatagcaattacctatgacggattagaggaagatgatgag
gtctttgaagtaattctgaactcccccgtgaatgcggttcttggcacaaagacaaaaact
gcagtgaaaattttggactcaaaaggaggacagtgccatccttcatatgccttcaatgca
aacatgcccaatgcgtgggagaagggcatttggagcctgctctccccaggggcttcctca
cgcaccacttctggttcctttcatccggaaagaagaccccttccatcttccaagcagcta
gcagtcgccaagggagacaccctgcgggactttgattctgaagatctttctctcatgaag
cttaggacccaagggaatggcaaaagcgtccatccatcctctgtttatagaaatggaaca
gacatcatctacaattatcatggaatgatttccctgaaactggaggatgacagttcctca
actcacaaaagtaaggccaaagtatccattgttagtcatccacaaaagacaatcaaagtg
gcagaactgcctcaagcagataaggaggaatccacaaccggctcacacttcccccaacag
gaccgtttgccctcatttccaaagaactgcacactggaattaaagggactcttccacttt
gaagaaagcctccaaaagctgtataagtgcaatggaattgcctggaaatcttggagccct
cacaccaaggtggaagataaatcatgcccagctgggtggcaccatcacttaggctactgc
cactccttgatcacagagcagaagggcacctggatcatagccgcccaagcttgcagggaa
catcacctgggcagccttgtaactgtcctctccaggcagcatatgcaatggctttgggac
atcagtggaagaaagcccttttggataggtttgaatgaccaagtgcatgctggccactgg
gagtggatcggcggtgaacctgtgaccttcaccaactggaggagagggcctcctcaacgt
tcaaagcctggcaagaactgtgttttggttcaaagacaaggaaaatggcaaacaaaggac
tgtaagaagggcagatctcacaattatatgtgctccaggaaactctaa
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integrated database retrieval system
