Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112412445
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Entry
112412445 CDS
T08872
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nasi03016
]
112412445
Enzymes [BR:
nasi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
112412445
Transfer RNA biogenesis [BR:
nasi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
112412445
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
112412445
NCBI-ProteinID:
XP_024619905
UniProt:
A0A341CZS7
LinkDB
All DBs
Position
Unknown
AA seq
730 aa
AA seq
DB search
MDPSLDMWDFSSLISLWINRFYIYLGFAFGFSLWICFQIVIRKQNKNSQEKTVPKASRDL
TTNGYISLQKKEVFVSGVKIFYGSQTGKAKGFATVLAEAVSSLDLPVAVINLKEYDPDDH
LVEEVTSKNVSAFLVATYTDGRPTESAEWFCRWLEEAANDFRFGKTYLKGVRYAVFGLGN
SAYVNHFNKVGKNVDKWLWMLGAHRVMSRGDGDCNVVKSKHGSIEADFTAWKARFISRLQ
ALCKGERKPCGGNCKKGKCESNQHGSEAMEPGSHAQEGFHQRDAEQEEPFGSTSEEESGT
EDHQSLKSVIDVEDLGKIMDRMKREKREKERQEGETSLIRSTVKNEAGERRAMITPALRE
ALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMETTPSLACANKCVF
CWRHHTNPVGTEWRWKMDQAEMILKEAIENHQNVMKQFRGVPGVREERFEEGMTVKHCAL
SLVGEPIMYPEINRFLKLLHERKISSFLVTNAQFPAEIRNLKPVTQLYVSVDASTKESLK
KIDRPLFKDFWQRFLDSLKALAAKQQRTVYRLTLVKAWNVDELQAYAKLVSLGNPDFIEV
KGVTYCGESSASSLTMANVPWHEEVVRFVCELVDLIPDYEIACEHEHSNCLLIAHKKFKI
GREWWTWIDYSRFQELIQEYEDSGGSKTFSAEDYMAKTPHWALFGASERGFDPKDTRYQR
KNKSKDISGC
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atggatccttctttggatatgtgggacttctcatctttaatatcattatggataaacagg
ttttacatatatttgggctttgcctttggctttagcctttggatttgtttccagattgtc
atcagaaagcagaacaaaaactcacaggagaaaaccgttccgaaagcatctcgggatttg
acgacaaatggctatatctctcttcaaaagaaggaagtctttgtgtctggagtgaagatt
ttctatggttctcagactggcaaagcaaagggatttgcgacagttcttgccgaagcagtt
agctcccttgatctccctgtggcagttattaatctgaaggaatatgacccagatgaccat
ctagtggaagaggttaccagtaaaaatgtctctgccttcctggttgctacctacactgat
ggtcggccgactgagagcgcagagtggttctgcaggtggctagaggaagcagccaatgac
tttcgatttggcaaaacgtacctcaagggtgtgagatacgcagtgtttggcctgggaaat
tctgcgtacgtgaaccacttcaacaaggtggggaagaacgtggacaagtggctctggatg
ctcggcgcccatcgtgtgatgtcccgaggggacggtgactgcaacgtggttaaaagcaaa
cacggcagcattgaggccgacttcacagcgtggaaggctaggttcatctcccggctacag
gcgctctgtaaaggagagagaaaaccctgtggtggcaactgcaagaagggcaaatgcgag
tctaatcagcacggctcagaggcaatggagccagggtctcacgcccaagagggattccat
cagagagacgctgagcaggaagagccctttgggagcaccagtgaggaagagtctggtact
gaggaccatcagagtctaaaatctgtcattgatgttgaagaccttggcaagattatggat
cgtatgaagagagaaaagagagaaaaggagcggcaggaaggggaaactagtttgatcagg
agcacagtgaagaatgaagccggtgaaagaagagctatgataactcctgctctccgagaa
gcccttactaaacaaggttatcagttgattgggagccactctggggtgaagctttgcagg
tggacaaagtccatgctccgagggagaggaggttgctataaacatacgttctatggcatt
gaaagccatcgttgcatggaaactaccccgagcttggcgtgtgcaaataaatgtgtcttc
tgttggcggcaccacaccaatccagtgggtactgaatggcggtggaagatggaccaggct
gaaatgatcttaaaggaagccattgaaaaccatcagaacgtgatgaagcagtttagagga
gtgccaggtgtcagagaggaacgctttgaggaaggaatgacagtaaagcactgtgcatta
tcccttgtgggagaacccatcatgtacccagaaatcaacaggtttttgaagctactccac
gagcgtaaaatctccagtttcctggtcacaaatgcacagttccctgcggaaatcaggaac
ctcaaaccagttacccagctatacgtcagtgtggacgccagcaccaaagagagcctgaag
aaaattgaccgcccgctcttcaaggatttctggcaaagattcctcgacagtttaaaagcc
ttggctgcaaagcaacaacgtactgtctataggctgactctggtgaaagcatggaacgtg
gatgaactccaggcctatgctaagctggtgtccctggggaaccctgacttcatcgaggtg
aagggtgttacctactgtggagagagttcggcaagcagtcttaccatggccaacgtgccc
tggcacgaagaagtggtgcgctttgtctgtgagttggtggatctgatccccgactatgaa
attgcttgtgaacacgaacattccaactgcctcctgatagctcacaagaagtttaagatt
ggcagagaatggtggacgtggattgattacagccgcttccaggagctcatccaggaatat
gaagacagtggtggatccaaaactttcagtgccgaggattacatggccaaaactcctcac
tgggcgttatttggtgccagcgaaagaggctttgatcccaaggacacaagatatcagaga
aagaacaaatcaaaggatatatctggatgttga
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