Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise): 112415779
Help
Entry
112415779 CDS
T08872
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
nasi
Neophocaena asiaeorientalis asiaeorientalis (Yangtze finless porpoise)
Brite
KEGG Orthology (KO) [BR:
nasi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nasi04040
]
112415779 (SCN10A)
Ion channels [BR:
nasi04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
112415779 (SCN10A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
CcmD_alt
Na_trans_cytopl
Lustrin_cystein
IQ
Motif
Other DBs
NCBI-GeneID:
112415779
NCBI-ProteinID:
XP_024624706
UniProt:
A0A341DCS5
LinkDB
All DBs
Position
Unknown
AA seq
1965 aa
AA seq
DB search
MEFPSGSLETTNFHRFTPESLVEIEKRIAAKQEAKKAKEKSKKQKDQEEKTRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLWFSLFITITILANCVGMTQTELPERMEYVFTVIYTFEALIKILARGF
CLNEFTYLRDPWNWLDFSVITLAYVGEAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVG
ALIHSVRKLADVTILTIFCLSVFALVGLQLFKGNLKNKCVKNCTVVNETANYSSHEKREW
NFCHRDPDFYTNKPGTSDPLLCGNGSDSGHCPEGYFCLKTSDNPDFNYTSFDSFAWAFLS
LFRLMTQDSWERLYQQTLRASGKIYMFFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATT
DEIEAKEKKFQEALQMLWTEQEVLAALGVDTASLHSHNGSPLASKNASVRRHRMKPRVSE
GSTDDNKSPQTESYNEHRMSFLGLTSGRHQASHGSVFHFQAPGRDISFPDGVTDDGVFPG
DYQSHRGSLLLGRDASQQGPLPSSPLPQTPSPGLGHGEDGPPTLPTGELAPGAIEVSVSD
AGQKTYLTAEYLNEPLRTQRAMSVVSIMTSVLEELEESKQRCPPCLTSLARKYLIWDCCP
TWVKLKTLLFATVTDPFAELTITLCIVVNTIFMAMEHYGMSPAFEAMLQIGNIVFTVFFT
AEMVFKIIAFDPYYYFQKKWNIFDCIIVTVSLIELGAVRKGSLTVLRTFRLLRVFKLAKS
WPTLNTLIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRRKISAPNEEWPR
WHMHDFFHSFLIVFRILCGEWIENMWACMEVGQKSICLILFLTVMVLGNLVVLNLFIALL
LNSFSTDNLTAPEDDGEVNNLQVALARIQVLGRRIKKALCSFLNWPFLLPRPKAEPQLVV
KLPLSTSKAENHITADTAAGSPGGLLAPGGPRDDHSDFITNPNIWVSVPIAEGESDLDDL
EDDGEEDAQSTQQEVIPQGQQEQRPQVGRYEDHLPPRSSGSGMSSEDLAPYLGEKWKDEA
PAQGPTEGVDDTSSSEGSTVDCLDLGEILRKIPELADDLDEPDDCFTEGCIRHCPRCKVN
SSKFPWAMGWQVRKTCYVIVEHSWFESFIIFMILLSSGALAFEDFYLDQKPTVKALLEYT
DRVFTFIFVFEMLLKWVAYGFKSYFTNAWCWLDFLIVNISLTSLIAKVLQYSDMASIKAL
RTLRALRPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQK
CINKTSEGFLLVPWTTVNNMSDCERQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGW
MDIMYAAVDSREVNMQPKWEDNVYMYLYFIIFIIFGSFFTLNLFVGVIIDNFNQQKKKLG
GQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQTFDVIIMVLICLN
MITMMVETDEQSEEKTKILNKINQFFVAVFMGECVMKMFALRHYYFTNGWNVFDLIVVVL
SIGSLVFSAILTSLGNLFSPTLFRVIRLARIGRILRLIRGAKGIRTLLFALMMSLPALFN
IGLLLFLVMFIYSIFGMANFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDRLLSP
ILNTGPPYCDPNLPNSNGTRGDCGNPIVGILFFTTYIIISFLIVVNMYIAVILENFNVAT
KESTEPLSEDDFDMFYETWEKFDPEATQFITFSALSDFADTLSGPLRIPKPNGNILIQMD
LPLVPGDKIHCLDILFTFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWK
QEDISATVIQKAYRSYVLHRSMTIANPPPVPRAEEEAVSLPDEGFVAFVANENCVLPDKS
ETASATSFPPSYDSVTRGLSDQVNLSTSSSIQNKGEAATKEATGP
NT seq
5898 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctctgggtctctggaaactaccaacttccatcgattcaccccagagtct
ctggtggagattgaaaaacgaattgctgctaagcaggaggcaaagaaagccaaagagaag
tccaagaaacagaaggaccaggaagagaagactcggccccagcttgacttgaaagcatgt
aaccagctgcccaagttctatggtgagctcccagcagagctggtcggggagccactggag
gatctggaccccttctacagcacacaccggacatttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccctgtggttattcagtcctttcaacctgatcaga
agaacagctatcaaagtgtctgtccactcatatcctttgtggttcagtttatttataacc
atcactattttggccaattgtgtgggcatgacccaaaccgaacttccagagagaatggag
tatgtcttcactgtcatttatacctttgaagccttgataaagatactggcaagaggattt
tgtctaaatgagttcacttacctgcgagatccttggaactggctggattttagtgtcatc
accctggcgtatgttggtgaagccatagatctccgagggatatcaggcctgcggacgttc
agagtccttagagctttaaaaacagtgtctgtgatcccagggctgaaggtcatcgtggga
gccctgatccactcggtgaggaagctggctgacgtgaccatcctcaccatcttctgcctg
agtgtctttgccctggtgggcctgcagctcttcaagggcaacctcaagaacaaatgtgtc
aagaattgcacagttgtcaatgagacggccaattactcttctcatgaaaaacgggagtgg
aatttctgtcatagggacccagatttctacaccaacaaaccaggcacttctgatccctta
ctgtgtggcaatggatctgattcaggccactgccctgaaggttatttctgccttaaaaca
tctgacaacccagattttaactataccagctttgactcctttgcttgggctttcctctca
ctgttccgcctcatgacacaggattcctgggaacgcctctaccagcagaccctgagggct
tctgggaaaatctatatgttttttttcgtgcttgttatcttcctggggtctttctacctg
gtcaatttgattttggctgtggtcaccatggcatatgaggagcagaaccaggcaaccact
gatgaaattgaagccaaggagaagaagttccaggaggcccttcagatgctctggacggag
caggaggtgctggcagccctgggggttgacacagcctctctccactcccacaatggatcc
cctttggcctccaaaaacgccagtgtgagaaggcacagaatgaagccaagggtgtcagag
ggctccacagatgataacaagtcaccccagactgagtcttacaacgagcacagaatgtct
ttcctaggcctcacctcggggagacaccaggctagccatggaagtgtgttccatttccag
gcccctggccgagacatctcattccctgatggggtcacagatgatggagtctttcctgga
gactatcaaagccatcggggctctctgctgctgggtagggatgcaagccagcaaggcccc
ctccctagcagtccactgcctcaaactcccagccctggcttagggcatggagaagatgga
cccccaacattgcccactggtgagcttgcccctggagccatcgaagtctcggtatctgat
gcaggacagaagacttacttgacagcagaatacttgaatgaacctctccgaacccaaagg
gcaatgagtgttgtcagtatcatgacctctgtcctcgaggaactcgaggagtctaaacag
aggtgcccaccctgcttgaccagcttggctcggaagtatctgatctgggattgctgcccc
acgtgggtgaagcttaagacccttctcttcgcgactgtgacagacccctttgcagagctc
acgatcaccctgtgcattgtggtgaacaccatcttcatggccatggagcactacggcatg
agtcccgctttcgaagccatgcttcagattggcaacattgtctttaccgtgttttttact
gctgaaatggtcttcaaaatcatagcgttcgatccctactattacttccagaagaagtgg
aacatctttgattgcatcatcgtcacagtgagcctgatagagctgggtgcggtcaggaag
gggagcctgacagtgctgcggaccttccgcctgttgcgggtcttcaagctggccaagtca
tggccgaccttaaacacgctcatcaagatcatcggcaactcggtgggggctctggggaac
ctcaccatcatcctggccatcattgtcttcgtctttgctctggttggcaagcagctcctc
ggggacaactaccgtgacaaccggcgcaaaatctcagcacctaacgaagaatggccacgc
tggcacatgcacgacttcttccactccttcctcattgtcttccggatcctctgtggagag
tggattgagaacatgtgggcctgcatggaagtcggccagaagtccatctgcctcatcctt
ttcttgacggttatggtgctgggcaacctggtggtgcttaacctgttcattgccttgctg
ctgaactccttcagcaccgacaacctcacagccccagaggacgacggggaggtgaacaac
ctgcaggtggccctagcgaggatccaggtgttaggccggcgcatcaagaaggccctttgc
agcttcctcaactggcccttcttgctcccccggcccaaggcagagccccagctggtggtg
aaactcccactctccacctccaaagctgagaaccacattactgctgacacggctgcgggg
agccctggagggctcctggctcccggaggccccagggatgaccacagtgacttcatcacc
aatcctaacatatgggtctctgtgcccattgccgagggcgagtctgacctcgatgacttg
gaggatgatggtgaggaggatgctcagagcacccagcaggaagtgatcccccaagggcag
caggagcagcggccacaagtcgggagatatgaggaccacctgccacccaggagctcaggt
tctggaatgtcctctgaggacctggctccatacctaggtgagaagtggaaagacgaggct
cctgctcagggccctacagagggagtggacgacacgagctcctctgaaggcagcactgtg
gactgcctggatcttggggagatcctgaggaagatccctgagctggcggatgacctcgat
gagccagatgactgcttcacagaaggctgcattcgccactgtccccgctgcaaagtgaac
agctccaagtttccatgggccatgggctggcaggtgcgcaagacctgctacgtcattgtg
gagcacagctggttcgagagctttatcatcttcatgatcctgctcagcagtggagcgctg
gcctttgaagatttttaccttgaccagaagcccacggttaaggccttgctggagtacacc
gacagggtgttcacgtttatctttgtgtttgagatgctgctcaaatgggtggcctatggc
tttaaaagttacttcaccaatgcctggtgctggctggacttcctcatcgtgaacatctca
ctgacaagccttatagcgaaggtgctgcagtattctgatatggcatccatcaaagccctt
cggaccctccgtgccctgcggccactgcgggccctgtctcgatttgaaggcatgcgggtg
gtggtagatgccctggtaggcgccatcccctccatcatgaacgtcctcctcgtctgcctc
atcttctggctcatcttcagcatcatgggtgtgaacctcttcgcagggaagtttcagaaa
tgcatcaacaagaccagtgaaggcttccttcttgtgccttggactactgtgaataacatg
tctgactgtgaacgtcaaaaccacactggaagcttcttttgggtcaatgtgaaggtcaac
tttgataatgttgcaatgggctacctcgcacttctgcaggtggcaacctttaaaggctgg
atggacatcatgtacgcagctgtcgattcccgggaagtgaacatgcagcccaagtgggag
gacaacgtgtacatgtacttgtacttcatcatcttcatcatttttggcagcttcttcaca
ctcaatctcttcgttggggtcatcattgacaacttcaaccaacagaaaaaaaagttaggg
ggccaggacatctttatgacagaggagcagaagaagtactacaatgccatgaagaaactg
ggctccaagaagccccagaagcccatcccacggcccctgaacaagtaccagggctttgtc
tttgacatcgtgaccaggcagactttcgacgtcatcatcatggtcctcatctgcctcaac
atgatcaccatgatggtggagactgacgagcagagtgaagaaaagacaaaaatcctaaac
aaaatcaaccagttctttgtggccgtcttcatgggcgagtgtgtcatgaagatgttcgcc
ttgaggcattactacttcaccaatggctggaatgtatttgacttaattgtcgtggtcctc
tccattggaagcctggtgttttctgcaattcttacatcgcttggaaatttattctcccca
acgctcttccgagtcatccgcctggcccggatcggccgcatcctcaggctgatccgtggg
gccaagggcatccgcacgctgctcttcgcgctcatgatgtctctgcccgccctcttcaac
attgggctgctgctcttcctggtcatgttcatctactccatcttcggcatggccaacttc
gcctacgtcaagtgggaggctggcattgatgacatgttcaacttccagaccttcgccaac
agcatgctgtgcctcttccagatcaccacgtcggcaggctgggacaggcttctcagcccc
atcctcaacacggggcctccctactgcgaccccaacctgcccaacagcaacggcactaga
ggggactgtgggaaccccatcgtgggcatcctcttcttcactacctacatcatcatctcc
ttcctcatcgtggtcaacatgtacattgcggtgattctggaaaacttcaatgtggccacg
aaggagagtacggagcccctgagcgaggatgactttgacatgttctacgagacttgggaa
aagttcgacccggaggccacccagttcattaccttctctgccctctcagactttgcagac
acgctctctggccccctgcggatcccaaaacccaatgggaatatattaatccagatggac
ttgcccttggtccctggagataaaatccactgtttggacatcctgtttaccttcaccaag
aatgttctgggagaatctggggagttggattctctgaaggcaaatatggaggagaaattt
atggcaactaatctttcaaaagcatcctatgaaccaatagcaaccaccctccggtggaag
caagaagacatttcagccactgtcatccaaaaggcctatcgcagctacgtgctgcaccgc
tccatgacgatcgccaatcccccgcctgtgcccagggctgaggaggaggctgtgtcactc
ccagatgaaggctttgttgcattcgtggcaaatgaaaactgtgtgctcccagacaaatct
gaaactgcctctgccacatctttcccaccatcctacgacagtgtcactagaggccttagt
gatcaagtcaacttaagcacgtctagctcgatacaaaacaaaggggaggctgccactaag
gaagccactgggccctag
DBGET
integrated database retrieval system
