Natrinema sp. J7-2: NJ7G_3223
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Entry
NJ7G_3223 CDS
T02184
Name
(GenBank) DNA/RNA helicase, superfamily ii
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nat
Natrinema sp. J7-2
Pathway
nat03022
Basal transcription factors
nat03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nat00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NJ7G_3223
09124 Replication and repair
03420 Nucleotide excision repair
NJ7G_3223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nat03021
]
NJ7G_3223
03400 DNA repair and recombination proteins [BR:
nat03400
]
NJ7G_3223
Enzymes [BR:
nat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NJ7G_3223
Transcription machinery [BR:
nat03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NJ7G_3223
DNA repair and recombination proteins [BR:
nat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NJ7G_3223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
ERCC3_RAD25_C
Helicase_C
DEAD
SNF2-rel_dom
SWI2_SNF2
GntR
CobA_CobO_BtuR
HTH_Crp_2
HTH_DeoR
HTH_24
HTH_36
HTH_11
SoFic-like_C
AAA
AAA_22
HTH_64
AAA_30
Replic_Relax
HTH_20
FaeA
HTH_29
Motif
Other DBs
NCBI-ProteinID:
AFO58443
UniProt:
I7CW49
LinkDB
All DBs
Position
2785041..2786948
Genome browser
AA seq
635 aa
AA seq
DB search
MSSIRKIYQVKPFVTTKDVAKEIGCSRDTARRKLNQLVAEDVIEAEQVGGRAKVWYGLQE
ATQQQNENERTSQSVLPDSSSEQDHDLKEEQAAESTAKKNEEDEEERVMFFPGRREIVVD
SPTDTTQRTLAQTSHLVDSTGDGYLYKVDEADVWNAPYDSFDALRRALIELVGEDQWDGG
FESRIRDDWNRAHQFRLRTDPDGYVVLEAKDAEVFDNITDRKLEYGDHYTKFLSNTELRV
TKGGEANVKETLYEAGYPVIDERRLEEGASLGISLVNDIYLRDYQKEWINQFAVRRSGVF
VGPSGSGKTIAALGVMEEIAGETLIIVPNRELVHQWEKEITEKTTLSAHQIGKYHGGTKQ
IRPVTIATYDTAAMSRHRKLFNERDWGLVIADECHHAVASTWKRFREIQSKARLGLSATP
VREADDPKEIYTLIGPPIGTDWGSLFAEGWVEKPDVEIVSVPWASDTARERYQRASGSKR
LIEAARNPKKSSVIKSLLKEHRSQKTLIFVDWIKQGKELKDELNLPFVYGDTGHKEREQI
YDRFREGEIDTLIISRIGDEGIDLPDAEVAILASTMGSSRSQTGQRAGRTMRPLGDAKVY
IVLTRGSGEEDWGRESTQYLAEKGINVTKTSWVES
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
ttgtcttctatcaggaagatctaccaggtcaagcccttcgttacgaccaaggatgtggcc
aaggagattggatgttctcgtgataccgctcggaggaaactgaaccaacttgtcgcggag
gatgttatcgaagccgagcaggttggtggacgggcaaaagtctggtatggtctacaagag
gcgacccaacagcagaacgaaaatgagcgaacaagccaatctgtcttgccggactcttct
tcggaacaggatcacgacttgaaagaagagcaggctgcagaatctactgcaaagaagaac
gaggaggatgaagaagaacgggtaatgttcttcccgggtcgacgcgagatagtagtggac
tctccaactgatacgacccagagaacattggcccaaacctcccatttggtcgactctaca
ggggatggctacctctacaaggttgatgaggcagatgtctggaatgcgccctatgactcg
tttgacgctttacgtagagcgcttatcgaactcgttggtgaagatcaatgggatggcgga
tttgagagtcggattagagatgattggaaccgcgcccaccagttccgtcttagaacagat
ccagatggctatgtcgttcttgaagccaaagacgcagaagttttcgataatataactgat
cggaaattggaatatggtgatcactacactaagttcctttccaatactgaacttcgagtg
actaaaggtggcgaagcaaatgttaaagagacactctacgaggcaggataccctgtaatt
gatgaacgtcgattagaggaaggtgcttctcttggtattagccttgttaatgacatttac
ctcagggattaccaaaaggaatggataaatcaatttgccgttcgaagatctggagtattc
gttggtccttctggcagcggtaagacaatagctgcactgggtgtgatggaggagatcgct
ggtgagacactcattattgtcccaaaccgagaattagtccaccagtgggaaaaagagata
actgagaaaacaactctatcggcacatcagattggaaagtaccatggtggaacgaagcaa
attcgaccagttaccattgccacctacgatactgcggcgatgagccgacaccgaaagttg
ttcaacgaacgggattggggacttgttatcgccgatgagtgccaccatgcagtggcctcg
acctggaaacggttcagagaaatacagtcaaaagcccgtctcggcttatcagcaacacct
gttcgagaagccgatgatcctaaggaaatctatactctcattggtccaccaattggaacg
gattggggatcactttttgccgaaggatgggtagaaaaaccagatgtagagatcgtttct
gttccttgggcaagcgatacagcgcgcgaacggtatcaacgggcttcaggaagcaaacgc
ctcatcgaggcagctcggaacccaaagaaatcctccgtaattaaatctttacttaaagag
catagaagccagaaaactctgatctttgttgactggatcaagcagggtaaggaactcaaa
gatgaactgaatttaccctttgtgtatggagatactggtcataaggaacgggagcaaata
tacgaccgtttccgagaaggcgaaattgacacgctgataatctctcgtattggtgatgag
ggcattgacctacccgatgctgaggtcgctatcctggcgtcaaccatgggttcgtcacga
tctcagactggccaacgagcggggaggacgatgcgtccactcggtgatgcaaaagtctat
atcgtccttacaagagggtcgggcgaagaagactggggccgagaaagtacgcaatacctc
gcagaaaaaggaatcaacgtaacgaagacgagttgggttgagagctaa
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