Nicotiana attenuata (coyote tobacco): 109215933 Help Entry 109215933         CDS       T05870                                  Name (RefSeq) DNA ligase 1-like   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism nau  Nicotiana attenuata (coyote tobacco) Pathway nau03030   DNA replication nau03410   Base excision repair nau03420   Nucleotide excision repair nau03430   Mismatch repair Brite KEGG Orthology (KO) [BR:nau00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     109215933    03410 Base excision repair     109215933    03420 Nucleotide excision repair     109215933    03430 Mismatch repair     109215933  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:nau03032]     109215933    03400 DNA repair and recombination proteins [BR:nau03400]     109215933 Enzymes [BR:nau01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      109215933     6.5.1.6  DNA ligase (ATP or NAD+)      109215933     6.5.1.7  DNA ligase (ATP, ADP or GTP)      109215933 DNA replication proteins [BR:nau03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     109215933  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      109215933 DNA repair and recombination proteins [BR:nau03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      109215933    NER (nucleotide excision repair)     Other NER factors      109215933    MMR (mismatch excision repair)     Other MMR factors      109215933 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Motif Other DBs NCBI-GeneID:  109215933 NCBI-ProteinID:  XP_019235601 UniProt:  A0A1J6K5X6 LinkDB All DBs Position Unknown AA seq 775 aa AA seqDB search MLPLRSCCHHFTQPSLYNRLLFSLKPSSVFLLISPFNPLKTLTPLFLNPNSRTMSTRPSA FDVLMANSKKKTPTQDSSPKKRKTPEAETSNKTAILENHNQDSVLKPNEDTHLVNESKSE EVLVKKQKMISPDESVTELKKKAASFDPRKAAYWRDGERVPFMFVVKAFDAISKESGRIV ITEIVTNMLRTVIETTPEDLLPVVYLSANKIAAAHDGLELGIGDASIIKALAEACGTKEA HIKKQYKELGDLGLVAKASRSSQPLMRKPEALTVAKVFDTFRIIAKESGKDSQEKKKNYI KSLLVAATDCEPQYLIRLLQTKLRIGLAEQTLLVALAHASVYSDKHSSPPAGLDSPLEEA AKIVKQVYSVIPVYEKVVPALLADGVWKLSETCNFSPGVPVGPMLAKPTKGVSEILDKFQ DMEFTCEYKYDGERAQIHYMEDGSVEIYSRNAERNTGKFPDVVAAISRLKKSSATSFVLD CELVAYDREKQKILPFQILSTRARKNVVMSDIKVNVCIYAFDILYLNGQPLLQEQLNVRR EHLYKSFEEEPGYFQFATAVTSNDLEEITKFLEAAVNDSNEGLIIKTLSRDATYEPSKRS NNWLKLKKDYMESIGDSLDLVPIAAFHGRGKRTGGYGAFLLACYDSNNEEFQSICKIGTG FSEAMLEERSSSLRSKVIPKPKSYYRYAETINPDVWFEPTEVWEVKAADLTISPVHRAAQ GIVDRDKGISLRFPRLIRVREDKNPEQASSADMVADMFNAQKHNHKNDKDDNEED NT seq 2328 nt NT seq  +upstreamnt  +downstreamnt atgttgccgttgcgctcatgctgtcaccatttcactcaaccttctctttacaaccgtctc cttttctcccttaaaccctcttcagtctttctccttatatccccctttaatccccttaaa acccttacaccccttttcctaaaccctaattcaagaaccatgtccactcgtccctctgct ttcgatgtccttatggcaaattccaagaaaaaaaccccaacacaagattcttcacccaag aaacgcaaaaccccagaagctgaaacttctaataaaactgctattctcgaaaatcataat caagattcagttttgaagccaaatgaggacacccatttggttaatgagtcgaaaagtgaa gaggttttggtgaagaaacagaagatgataagtccagatgagagtgtgactgagctgaag aaaaaagccgctagctttgatccaagaaaggctgcatattggagggatggtgagagagtg ccattcatgtttgtagttaaggcgttcgatgcgatttcgaaggagtcaggaagaattgta attactgaaattgtgactaatatgttgaggactgtgattgagacgacgcccgaggatttg ttgcctgttgtgtacctttcggctaacaagattgcagctgcacatgatggtttggagctt ggtattggagatgcttcgattatcaaggcacttgctgaagcttgtggcactaaagaagca catattaagaagcaatataaggagcttggagacttgggccttgttgcaaaagcaagccgc tcatcacaacctctgatgcgaaaaccagaagcattgactgttgctaaagtttttgacacg tttcggattattgccaaggaatctgggaaggatagtcaggaaaagaaaaagaattacatt aaatcactacttgttgcagctactgattgtgaaccccaatatttgattcgtctcctccag acaaagctacgcattggtttggctgaacaaacactcttagtcgcacttgctcatgcttct gtgtactcagataagcattcatcacctcctgcaggtctagattctcctttggaagaggct gccaagattgtaaagcaagtgtactctgtaattccggtttatgaaaaagttgttcctgct cttctagctgatggtgtttggaagctttcagaaacatgcaacttctcacctggtgttccg gttggacctatgctagctaagccaaccaaaggagtatctgaaattcttgataagtttcag gatatggagttcacatgtgaatacaagtatgacggtgaacgtgctcagatacactacatg gaagatggttctgttgagatatacagccgaaatgcagaaagaaatactggaaaatttccc gacgttgttgctgctatctcaagattgaagaaatcttctgcaacatcatttgttcttgat tgtgaactggtcgcatatgaccgtgagaaacagaagatcctgccctttcagatcctcagt acgcgtgctcgtaagaatgttgtcatgagtgatatcaaggtcaacgtttgcatatatgct tttgatatcttgtatcttaacggacaaccacttcttcaagagcaacttaatgttcgcaga gagcatctttacaagtcatttgaagaagaacccggatatttccaatttgctacagctgta acctcaaacgatcttgaggaaataacgaaatttcttgaagctgcagtgaatgacagtaat gagggattgataatcaagacactaagtagagatgctacatatgagccttcaaagcggtca aataactggctaaaactgaagaaggactacatggaaagtattggcgactcactggatttg gtaccaattgctgcttttcatggtcgggggaaacgtactggtggttacggagcctttctc ctagcttgttatgatagcaacaacgaggagttccagagcatctgtaaaattggaactgga ttttctgaagcaatgcttgaagaacgctcttccagccttcgttccaaagttattccgaaa ccaaagtcatattacaggtatgcggaaaccatcaatccagatgtatggtttgaacctacc gaggtatgggaagtgaaagcagctgatcttaccatcagccctgtccaccgtgctgcgcaa ggtatcgtggatcgcgataagggaatatctttaagatttccacgtttgattcgtgtacga gaagacaagaatcccgaacaggcctcatcagcagacatggtcgcggatatgttcaatgca cagaagcacaatcataaaaatgataaggatgataatgaagaagactaa

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