Nicotiana attenuata (coyote tobacco): 109229421
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Entry
109229421 CDS
T05870
Name
(RefSeq) mRNA-capping enzyme-like isoform X1
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
109229421
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109229421
Enzymes [BR:
nau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
109229421
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
109229421
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
109229421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Y_phosphatase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
109229421
NCBI-ProteinID:
XP_019250397
LinkDB
All DBs
Position
7:87194339..87226601
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AA seq
688 aa
AA seq
DB search
MDLNASPQPQDDDEIFGQQLEEEPEESNVEHSDDRADYTSAVEISRREREERIQRIKRQR
PDDRPAYPSQPRIRDEIFQTKRQKPSSRLPPGWLDCPAFGQEIGCIIPSKVPLDETFNDC
VLPGKRYSFRQVLHQQRVLGRKLGMVIDLTNTTRYYSLSDWRKEGIKHVKIQCRGRDSVP
DNESVNLFVYEVSQFLARQKHAKKYILVHCTHGHNRTGFMIIHYLMRTLPISVSQAIKIF
SDARPPGIYKPDYIDALYAFYHEKKPEMVVCPPTPEWKRSSELDLNGDAMPDDDDDGGPA
VPLPDNHEAQVVMSNDDILGDAIPQDQQNYMRQFCYQALKMTPGGRGPQFPGSHPVSLSR
DNLQLLRQRYYYATWKADGTRYMMLITMDGCFLIDRHFNFRRVQMRFPCRHTNEVRSYPV
SYQDGLAEKTHHFTLLDGEMVIDTLPDTQKQERRYLIYDLMALNHVSVIERPFYERWKMI
DKEVIEPRNYERQHIYQSRNPYYRYELEPFRVRRKDFWLLSTVTKLLKEFIPKLSHEADG
LIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEVVDGRELLYLHERGKKKLMEGNRVVF
PDSSDPSDYSGKIVECSWDTSNQEWVWMRTRIDKGTPNDYNTYRKVFRSITDNITEEVLL
NEIYEIIRLPMYADRIHNDSKAHHVRRR
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggatctgaatgcctcgccacagccacaggatgacgatgagatctttggacaacaatta
gaagaggaaccggaagaatccaatgtagaacatagtgacgaccgtgcagattatacgagt
gcagtggagatttcacgtcgcgagcgggaggaaaggattcaaagaattaaaagacaacgt
ccagatgataggccagcatatccatctcagccacgaatacgcgatgagatttttcagacc
aagagacagaagcctagcagcagacttcctccaggttggttggattgtcctgcatttgga
caggagatcggttgcattattccttcaaaggttcctctggatgaaactttcaacgactgt
gttcttcccggcaagagatactcgtttaggcaagtcctccaccaacagagagttttagga
agaaagcttgggatggtgattgatctcacaaatacaactcgatactattcattgtcagat
tggaggaaggaaggcatcaagcatgttaagattcaatgcagaggccgtgattctgtacct
gacaatgagtctgtaaatttatttgtctatgaggtttcacaatttcttgcacgtcagaaa
catgcgaagaagtatattcttgtccattgcacacatgggcataatcgcactgggtttatg
atcattcattatctgatgcgtacgctgccgatatctgtcagccaggcaattaaaattttt
tctgatgctcgacctcctgggatctataagccggactatattgatgccttatatgccttt
tatcatgagaaaaaacctgaaatggttgtttgccctccaacacctgagtggaaaagatct
tctgagcttgatttgaatggcgatgctatgccggatgacgacgacgatggaggtcctgcg
gttcctttgcctgataatcatgaagcgcaagtggtaatgtcaaatgacgacattttggga
gatgcaatcccacaagatcagcaaaattatatgcggcagttctgttatcaagcactgaaa
atgaccccagggggtagaggcccacaatttcctggctctcatccagtctctcttagcagg
gacaacttgcaattgttgaggcagcgttactactatgccacatggaaggctgatgggaca
cggtatatgatgctgatcacgatggatggttgtttcttaattgatagacatttcaacttc
cgaagggttcagatgagatttccatgcagacacactaatgaagtacgctcatatccagtc
agctatcaggatggtttggccgaaaagacgcaccacttcactttacttgatggggagatg
gtaattgatactttgcctgacacacagaagcaggaaaggagatacctcatttatgatctg
atggcccttaatcatgtgtctgtcattgagcgacccttttatgaacggtggaaaatgatt
gacaaagaagtgattgagcccaggaattatgaacgtcaacatatataccagagtagaaac
ccttactatagatacgagttggagcctttcagggtgaggaggaaggatttttggttgctc
tctactgtcacgaaacttctcaaagaatttattccaaagctttcacatgaagcagacggt
ctcatttttcagggttgggatgatccttatgttcctcgcacgcatgaaggtctcttgaag
tggaaataccctgaaatgaactcagttgactttctgtttgaggtggtcgacggtcgtgaa
ttgctttatctacatgaacgagggaagaagaaactaatggaagggaatagagttgttttc
ccagatagttctgacccgtcagactactctggtaaaatagtagagtgttcttgggatacc
agtaaccaagaatgggtgtggatgaggaccagaattgataaaggaactccaaatgattac
aacacttacagaaaggtatttagaagtattactgacaacatcactgaagaagtattgttg
aatgagatctatgagatcatacgactgccaatgtatgctgataggatacataatgatagc
aaagctcaccatgtacgacgcagatga
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