Nicotiana attenuata (coyote tobacco): 109236535
Help
Entry
109236535 CDS
T05870
Name
(RefSeq) dnaJ homolog subfamily C GRV2 isoform X1
KO
K09533
DnaJ homolog subfamily C member 13
Organism
nau
Nicotiana attenuata (coyote tobacco)
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nau03041
]
109236535
03110 Chaperones and folding catalysts [BR:
nau03110
]
109236535
Spliceosome [BR:
nau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
109236535
Chaperones and folding catalysts [BR:
nau03110
]
Heat shock proteins
HSP40 / DNAJ
109236535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RME-8_N
GYF_2
DnaJ
Motif
Other DBs
NCBI-GeneID:
109236535
NCBI-ProteinID:
XP_019258268
UniProt:
A0A314LGE4
LinkDB
All DBs
Position
Unknown
AA seq
2596 aa
AA seq
DB search
MDFVSRHATDHHQPPTSESTTSSSSSSSAPPSSSHAHSSEEPEYLARYMVVKHSWRGRYK
RIFCISNFTLITLDPGTLSVTNSYDVGSDYDGAAPIIGRDDNSNEFTISVRTDGRGKFKA
MKFSSKYRASILTELHRIRWNKLGVVAEFPVLHLRRRTSEWVPFKLKITYIGVELIESKS
GELRWCLDFRDMGSPSIILLSDPYGKKNTDSGGFVLCPLYGRKSKAFQAAPGTTNAAIIS
NLTKTATSMVGVGLTVDNSQAVTLSEYINRRAKEAVGADETPCGAWLVTRLRSAARGTLN
TPGVSMSIGPKGGLGEHGDAVSRQLILTKVSLVERRPENYEAVIVRPLSAVGALVRFAEE
PQMFAIEFNDGCPIHVYASTSRDNLLAAVRDVLQTECQCPVPVLPRLTMPGHRIDPPCGR
FHLKFPASQQPVADLETATLHLKHLAVAAKDAVAEGGSIPGSRAKLWRRIREFNACIPYG
GVPSGIEVPEVTLMALITMLPAAPNLPPESPPLPPPSPKAAATVMGFIACLRRLLSSRSA
ASHVMSFPAAVGRIMGLFRNGSEGVAGETAGLVAVLIGGGPGETNMQTDTKGEWHATIMH
TKSVLFGQQSNLVVLVNRLRPVSVSPFLSMSIVEVLEAMVCEPHGETTQYTVFVELLRLV
AGLRRRLFALFGHPAESVRETVAVIMRTIAEEDAVAAESMRDAALRDGALLRHLLHALYL
PAGERREVSRQLVALWADSYQPALDLLSRVLPPGLVAYLHTRSNVVPVEGVTDQENSMLS
RRRRRLLHQRRIHPGKGITPQGHSLPSSTNYEVSEQAPGSAVPFRTSDGYQRAAVDSVPG
QVPTMQSSAVNAGEYFQAELSAAAVPQTDQSSTIPALDSPSTNIHDLAESNVANAVDSDV
SAISQDTGLPAPAQVVVEDAPVGCGRLLLNWPEFWRAFSLDHNRADLIWNERTRQELRES
LQAEVHNLDVEKERTEDIVPGGANRDSITDKESAPQISWNYSEFSVRYPSLSKEVCVGQY
YLRLLLESGTSGRAQDFPLRDPVAFFRALYHRFLCDADTGLTVDGAIPDELGPSDNWCDM
GRLDGFGGGGGSSVRELCARAMAIVYEQHYNTVGSFEGTAHITVLLDRTDDRALRHRLLL
LLKVLMKVLANVESCVLVGGCVLAVDLLTVVHEASERTTIPLQSNLIAASAFMEPLKEWM
FLDKDGAQAGPMEKDAIRRLWSKKEIDWTTRCWASGMPDWKKLRDIRELRWALAVRVPVL
TPTQVGEVALSILHSMVAAHSDIDDAGEIVTPTPRVKRILSSPRCIPHIAQAMLSGEPSV
VESAAALLKAIVTRNPKAMIKLYSTGAFYFALAYPGSNLLLIAQLFSVTHVHQAFHGGEE
AAVSSSLPLAKRSVLGGLLPESLLYVLERSGPAAFAAAMVSDSDTPEIIWTHKMRVENLI
RQVLQHLGDFTQKLSQHCHSLYEYAPMPPVTYPELRDEMWCHRYYLRNLCDEIRFPNWPI
VEHIEFLQSLLVMWREELTRRPMDLSEEEACKILEISLDEVSRDDAPKRKSQETVNISKQ
IENIDEEKLKRQYRKLAMKYHPDKNPEGREKFLAVQKAYERLQATMQGLQGPQLWRLLLL
LKGQCILYRRYGDVLEPFKYAGYPMLLNAITLDKDDNNFLSSDRASLLVAASELIWLTCA
SSSLNGEELVRDAGIQLLANLLSRCMCVVQPTTPSSELSTVIVTNVMRTFSVLSQFESAR
ADMLEFSGLVDDIVHCTKLELVPAAVDAALQTIAHVSVSSEFQDALLKAGILWYLLPLLF
QYDSTAEETDKSEAHGVGVSVQVAKNMHAVRTALALARLSGLGADENQTPYNMVAADALR
ALLTPKLASMLKDQSPKDLLFKLNSNLETPEIIWNTSTRAELLNFVDEQRASQDPNGSYD
LKDSHSFAYEALSKELFVGNVYLRVYNDQPDYETSEPEVFCVSLVDFISCLVRSDVAVGS
DIPSTTRTSDFQNDTTNGPYNEEQLSNDPSTPSDVKQMKKEENELVKKLQFALIALQNLL
TSTPDLASVFSAKEKLLPIFECFSVPVASTTIVPQLCLSVLSRLTTYAPCLEAIVSDGSS
LLLLLQMLHSSPSCREGALHVLYALASTPELAWAAAKHGGVVYILEVLLPLQEVPLQQRA
AAASLLGKLVGQPMHGPRVAITLARFLPDGLVSVIRDGPGEAVVSIVEQTTETPELVWTP
AMAASLSAQIATMASELYREQMKGSVVDWDVPEQATGQQEMRDEPQVGGIYVRLFLKDPK
FPLRNPKRFLEGLLDQYLSSIAATHYDVQSVDPELPLLLSAALVSLLRVHPALADHVGFL
GYVPKLVSAVAYEGRRETMAIGEVKNSDHSKEAYEADDSSMQPPSPTLQERVRLSCLRVL
HQLAASTTCAEAMAATSVGTPQVVPLLMKAIGWQGGSILALETLKRVVVAGNRARDALVA
QGLKVGLVEVLLGLLDWRAGGRNGLRSQMKWNESEASIGRVLAVEVLHAFAAEGAHCTKV
REILNASDVWSAYKDQRHDLFLPSNAQSAAAGVAGLIENSSSRLTYVLTAPPMQTGQAKP
PVLTTSDSNGKQDQGP
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtcagccgccatgccactgaccaccaccaacctccaacttctgaatccacc
acatcctcctcctcctcctcttctgctccaccctcctcctctcatgcccatagctccgaa
gagcccgagtacttggcccgttacatggttgtcaaacactcctggcgaggtcgatacaaa
aggattttttgcatttcaaatttcactttgattacactggatcccggtacattatcagtc
actaactcatacgatgttgggagtgattatgatggtgcggcccctatcattgggagagat
gacaattcaaatgagtttaccataagtgtgaggactgatggccgcgggaagttcaaggct
atgaagttctcttccaagtatagagcaagcattttgactgagttgcatagaattaggtgg
aataagcttggagtggttgcagagttccctgttttgcatctaaggaggaggacctctgag
tgggttccttttaagttgaaaattacttatataggagttgagcttatcgaatcaaaatct
ggagaacttcgttggtgcttggactttagagatatgggctctccttccattatcctccta
tctgacccttatggaaagaaaaatacagattccggaggttttgttctttgcccgctttat
ggaagaaaatctaaagctttccaagctgctccgggaactacaaacgctgccatcatatca
aatctgactaaaactgcgacatccatggtgggcgtgggattaactgtcgacaattctcaa
gcagtgaccttatctgagtacataaataggagagcaaaagaggctgttggggcagatgaa
actccttgtggtgcttggttagtaacaagattgcgctcagctgctcgggggactctgaat
actccaggagtaagtatgtctattggcccaaaagggggccttggagaacatggcgatgcg
gtatctcgtcaactcattctcactaaggtctcacttgtggaaagacgacctgagaactat
gaagctgttatcgtgcgtcctctatctgccgttggtgctcttgttcgatttgctgaggag
ccccaaatgtttgctatcgagtttaatgatggatgcccaattcatgtctatgctagcact
tctcgtgataacttacttgcagcagttcgtgatgtcttgcaaacagaatgccagtgtccc
gtcccggtgctaccaaggctaacaatgcctggtcatcgaattgatccgccatgtggcaga
tttcacttaaaatttcctgcttcacaacaacctgttgctgatttggaaactgcaactctg
catttaaaacacttggcagtagccgctaaagatgctgtggctgagggaggatccattcct
ggatcaagagcaaaattatggcggcggatacgagaatttaatgcatgtattccatatggt
ggagtaccttctggtattgaagtacctgaggtgacactgatggctttgattacaatgctt
ccagctgctcccaatctcccaccagagtcaccaccacttcccccgccgtctcctaaagct
gctgctacagtgatgggtttcattgcttgtttgcgtaggttgctttcatcaagaagtgct
gcttctcatgtgatgtcttttcctgctgctgttggccgtataatgggtctatttagaaat
gggtctgaaggagtagctggtgaaactgcaggccttgtggcggtacttattggtggtggt
ccaggggaaactaatatgcaaacagatacaaagggggaatggcatgcaacaataatgcat
accaagtctgtgctgtttggtcaacaaagtaatcttgtagttctggtaaatcggctaagg
cctgtatcagtatcgccatttttgtcaatgtctattgttgaggttcttgaggcaatggtc
tgtgaaccacatggagaaacaacccagtatacagtgtttgtggagttattacgtctagta
gctggcttgcgccgccggttgtttgcattgtttggacatcctgctgaaagtgtgcgagaa
acagtagctgtcattatgcgaacaattgctgaagaagatgcagttgcagcagaatcaatg
cgtgacgctgctttacgagatggtgcactactgcggcatttgttgcatgcactttacctt
ccagctggtgagcgacgtgaagttagcaggcaacttgtcgctctttgggctgactcttat
caacctgctcttgatctgttatctagagttttgcctccaggacttgttgcttatctgcac
accagatccaatgtggttccagttgaaggtgtgactgaccaggaaaattcaatgctgagt
aggagacgtagacgcttgcttcaccaaaggaggattcatcccgggaaagggatcacacct
caaggtcattctttgccttcttctactaactatgaagttagtgagcaagctcctggaagt
gctgtccctttcagaacttctgatggttatcagagagctgctgttgattcagttcctgga
caggtgccaacaatgcaatcttcagctgtgaatgcaggtgaatacttccaagctgagctg
tctgctgctgctgttcctcaaactgatcagtcgtcaaccattcctgctcttgacagtcct
tcgacaaatatacatgacttggctgaatcaaatgttgcaaatgctgtggattccgatgtt
agtgcaatttcccaggatacaggtcttcctgctcctgcacaggtagtggtcgaagatgca
cctgttggatgtggaaggttgttattgaattggccagaattttggcgagctttcagtctt
gaccataaccgtgctgacttgatttggaatgagcggaccaggcaggaattaagagagtcg
ttgcaggctgaggttcataatctagatgttgaaaaagaacgcactgaggatattgttcct
ggcggtgcaaacagagactcaataactgacaaagagagtgcgcctcaaatatcgtggaac
tacagcgagttttctgttagatatcctagcttatcaaaagaagtttgcgtaggccaatac
tatttgcgtttacttcttgagagtggcaccagtgggagggcacaagattttcccctacgt
gaccctgttgcttttttcagagccctctatcaccggtttctatgtgatgctgacactggg
cttactgtcgatggtgctattcctgatgaattaggtccttctgataattggtgtgatatg
ggaagattagatggttttggaggagggggaggctcctcagttagggagctctgtgcccgg
gccatggcaattgtttatgaacaacactacaacacagttggctcatttgaaggcacagca
cacattacagttctcttggacaggaccgatgatagagctttacgacaccgtcttcttctt
cttctaaaggtcttgatgaaggttttggcaaatgtagagtcatgtgtcttggttggtggc
tgtgtactggctgttgatctactaacagtagttcatgaagcttcagaaagaacaactata
cctctgcagtcgaacttgattgctgcttctgcttttatggaaccattaaaggagtggatg
tttcttgacaaggatggtgcacaagctggacctatggagaaggacgctattaggagactc
tggtcaaaaaaggaaatagattggaccacaagatgttgggcttctgggatgccagactgg
aagaagttgcgagatattcgtgagcttaggtgggctttggctgtccgagttcctgttctc
actccaacccaggtaggagaagtagcattgagcatattacatagcatggttgcagcacac
tcggatatagatgatgctggtgagatagttacgccaacacctagggtcaagcggatctta
tcaagtccacgttgcattccgcatattgctcaggctatgctctctggagaaccgagtgtt
gtagaaagtgctgctgctttgttgaaggccattgttactaggaacccaaaggcaatgata
aaactatatagcactggagccttttactttgctctagcttatcctggttccaatctcctc
ttaattgctcagctgttctctgtgactcatgttcatcaagcatttcatggaggggaagaa
gccgctgtctcctcttctttgcctttggcaaaacgcagtgttttgggtgggcttttacct
gagtcattgctatatgttctggaacgtagcggtcctgctgcatttgcagcagcaatggtt
tctgattctgacactcctgagattatttggacgcacaagatgcgagttgaaaatcttatt
cgtcaggtccttcagcatctaggtgattttacacagaagttgtcacaacattgccattct
ttgtatgaatatgctccgatgccacctgtgacatacccagagctaagggatgagatgtgg
tgccaccgttattaccttcgtaatttatgtgatgaaattcgctttcctaattggccaata
gttgaacacattgaattcctgcaatcactgctggttatgtggcgagaagagttaactcgg
agacccatggatctttctgaagaagaggcttgcaaaatactggagatttccttggatgag
gtatcaagagatgatgctcccaaaagaaaatcacaggagacagttaatatttctaagcag
attgagaacattgatgaagaaaagctcaagcggcaatatcgaaaacttgcaatgaagtat
catccagacaaaaatcctgaggggagggagaagtttctggcagtgcagaaagcttatgaa
cggctgcaggctacaatgcaaggactgcaaggtccacaactttggagactattgctttta
ttgaaaggacaatgcattttgtatagacgatatggagatgtactggagccatttaaatat
gctggttacccaatgttgttaaatgcaatcaccctggacaaagatgacaacaacttcctt
tcctctgatcgagcatctcttcttgttgccgcatccgaattgatatggctaacgtgtgca
tcttcttcactgaatggtgaagaacttgtaagggatgccggaatacaacttcttgcaaat
cttctgtcccgttgcatgtgtgtagtacaaccaactactccttccagtgaactatcgact
gtcattgtcacaaatgtgatgagaaccttttcagttttgagtcagtttgagagtgccaga
gctgacatgcttgaattttctggcctagttgatgatattgtacattgtactaaacttgag
cttgtaccagctgctgttgacgctgcccttcagacaattgctcatgtttctgtgtcatct
gaatttcaagatgctttacttaaggctggtattttgtggtacctgttgccacttttgttt
cagtatgattctactgcagaagagacggataagtcagaagctcatggtgttggtgttagt
gttcaagttgcaaagaatatgcatgctgtacggacagctctggctttggctagacttagt
ggtttgggtgctgatgagaatcagacaccatataatatggttgctgctgatgcgcttaga
gctttgctgacaccaaagcttgccagtatgctgaaagatcaatctcccaaagatctattg
ttcaaactaaattcgaatttggagaccccagagataatttggaatacgtcaacccgagca
gaactcttaaattttgttgacgagcagcgtgctagccaggatcccaatggttcatatgac
ctgaaagattctcattccttcgcatatgaagcattatctaaggaactttttgttggaaat
gtatatttgagagtgtacaatgaccaaccggattatgaaactagtgaaccggaggtcttc
tgtgtttcccttgttgattttatatcatgtctagtacggagtgatgttgcagtgggatca
gatattccgtcaaccaccaggacatcggatttccaaaatgatacgactaatggaccatat
aatgaagagcagctgtctaatgatccttcaactccttcagatgtgaaacagatgaagaaa
gaggaaaatgaattggttaagaaactccagtttgctctaattgcgctccagaatctcctg
acgagcaccccagatttggcatcagttttttctgcaaaagaaaaattattaccaattttt
gaatgcttctctgttcctgttgcttcaacaaccattgttccccaactgtgtttgagtgtc
ctgtcacgcttgacaacatatgctccgtgcttggaggcaattgtttctgatggatccagt
ctgctccttctattgcaaatgcttcactcctctcctagctgtcgtgaaggagctcttcat
gttctgtatgctttagctagcacaccagagcttgcatgggcagctgcgaagcatggtgga
gtagtttacattcttgaagttctcctgcctttgcaagaagtccctctgcagcaaagagca
gctgctgcctcgttgttgggaaagcttgttggacagccaatgcatggacctagagttgct
ataactctggctaggtttcttcctgatggcttggtatcggtcatcagggatggtcctggt
gaagctgttgtgagcattgttgaacaaacgacagagactccggaactcgtgtggactcca
gcgatggctgcttctttgtctgctcaaattgcaaccatggcatcagaactatatcgagaa
cagatgaaaggcagtgttgtcgattgggatgtacctgagcaggcaactggccaacaggaa
atgagggatgagccgcaggttggaggaatctatgttagactatttttaaaagatccaaaa
tttcctcttagaaacccgaagcgatttttggaaggactactggatcaatatctttcatca
attgctgcgacacattatgatgtccaatctgttgaccccgaacttcctctgcttctatct
gctgctctggtgtccttattaagggtgcaccctgctcttgcagatcatgttggattttta
ggatatgtgccaaaacttgtgtctgcagtggcatatgaagggagaagagaaacaatggcc
atcggggaagtaaaaaattctgaccactccaaggaagcctatgaggctgacgatagctcc
atgcagcccccttcaccaacactacaagagcgtgtgcgtcttagttgtttgcgtgttctg
catcaacttgcagcaagtacaacgtgcgctgaagctatggcagctactagtgttgggaca
ccccaggttgttccccttttgatgaaagctatcggatggcaaggtggaagtattctagct
cttgaaacattaaaacgcgtagtcgttgctggaaaccgagctagggatgcgttggttgct
cagggacttaaggttggtcttgttgaagtactcctaggccttcttgattggagagctgga
ggaagaaatggacttcgctctcagatgaagtggaatgagtctgaagcatctattggcagg
gtgcttgcagttgaggttttgcatgcttttgcggcagaaggggcccactgtactaaagtt
cgtgagatactaaatgcttccgatgtttggagtgcttataaggatcagagacatgatctg
ttcctcccttcaaatgcccaatctgcagctgctggagttgctggattaattgagaattcc
tcctccaggctgacttatgttctgacagctcctcccatgcaaactggtcaagcaaaacct
ccagtcttgaccacatctgattcaaatggcaagcaggatcaaggtccataa
DBGET
integrated database retrieval system
