Nicotiana attenuata (coyote tobacco): 109237102
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Entry
109237102 CDS
T05870
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
nau03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109237102
03015 mRNA surveillance pathway
109237102
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109237102
03041 Spliceosome [BR:
nau03041
]
109237102
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
109237102
Spliceosome [BR:
nau03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
109237102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
109237102
NCBI-ProteinID:
XP_019258906
UniProt:
A0A314LGD4
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MSGGFFRGTSAEQDTRFSNKQAKLLKSQKFAPELEHLVDMTKVKMDVMKPWIAKRVTELI
GFEDEVLINFIYGLLERKVVNGKEVQISLTGFMERNTGKFMKELWALLLSAQNNASGVPQ
QFLEAKEEEMRKKKAETDRIASEIQKKKERESRELDQEKRKMMDDYASNSRQKKAALEPS
PKHQPRVRSTDDLDHVDRNGSRSIHRVSRSPRSADHSPSPRRSRSIGKSFSNSRSYSGER
RRSRSTSGSPLERRGRSLSSERVYRSPPRRSVSPRRKHSPQQSLSPPRHRQRSTSRVRQG
SPSVARYRRRSPFRRRRSPIRCRSRSPIQRRSRSPIRRRSRSPMWRRSRSPSRRSPVRYR
SRSPIRRRSPLRRRTPNPTKRRSPSPVGRGYHRSPLSPRSSLSPAQRKSFISGRKRSLTP
ARRSISPQESLSPSPIYRKSPSPIRKRILKNESSPVQSPRGKIRSREKYSPVRHAPPVKT
EAHKGSRSLERRRPISSRSPQRDIYDRKDSRKKESLLPPRRRRSPSVSESPRSRSASESP
PTKRERSPSENRGPRSTLNQRERKTIDTDSPNPGKLREDRVSSNISEKIADEKEMNHSRE
AFEHKPRSSRKIPSAPDSNKDLGKGRDDEEFSEFHSHSDRMESRKQNEVMKSEKSSAMME
QTKELDQQKSPSSHRHSHSVKRERELYAGESFKAEKENLSHANYIKGKELLESETPLTSS
RKVEQNDQSGDEGSGSEESEKRRAKVKEKRKHKRSGKYESSSDDSYDSDVEDRKEAKRRR
KEERRWKKEEKRKRREERQRRKEERHAQKLKLKSANAMSSPSDTERNPDCHASYDEHLRK
GDVEESESVQKRLEIELREKALESLRAKKGISH
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcgggtttttccggggtacgtcggccgagcaggacactcggttctctaataag
caagctaagctgttgaaatctcagaagttcgctcctgaattggaacatctggtggacatg
accaaagtgaagatggatgtaatgaaaccatggatagccaaacgagttaccgagcttatt
ggttttgaagatgaagttcttatcaatttcatttatggccttcttgaacgaaaggtagtt
aacggcaaggaggttcaaatttcacttactggattcatggaaagaaacactggaaaattt
atgaaagagctttgggcgctactacttagtgcacagaacaatgcaagcggtgttcctcag
cagttcctagaagccaaagaagaggaaatgagaaagaagaaggctgagacggatcgaatt
gccagcgagattcagaagaaaaaggagagagagagtagggagctggatcaagagaaaagg
aagatgatggacgattatgccagcaattcgagacaaaaaaaggctgcattggagccaagt
ccgaaacaccagcctcgggtgcgctcgacagatgatttagaccatgttgacagaaatggc
tcaagaagcatacacagggtctctagatccccacgttcagcagatcattcaccctccccg
aggagatcaaggtcaatcggcaagtcattttctaattcaaggagttattctggtgaaagg
cgcaggtcacgaagtacatccggatctcctttagaacggagaggtcgctcactttcatct
gaaagggtataccgctctccaccaaggcgctctgtttcacctcgtaggaagcattcacct
caacaatctctctctccaccaagacacaggcaaagatcgacctcccgagtacgtcaaggg
tcaccttctgttgcacggtatcgaagacgttctccattccgacgtaggaggtctcccatt
cgatgtagatcgaggtctcccattcaacgtagatcgaggtctccgattaggcgtagatca
cgatcccctatgtggcgtaggtcacggtctccaagtagacgctcaccagtgcgatataga
tcaaggtcacctattagacgtcgatcaccacttcggcgcagaacaccgaatccaacaaaa
cgtaggtccccttctccggtgggtcggggttaccaccgatctccattgagtcctcgaagt
tctctatctccagctcaacgaaaatccttcatatctggcaggaaaagatccttaacccct
gccagaaggtctatttcacctcaagaatcactttctccctcacccatttaccgcaagtct
ccttcaccaatcagaaagagaatattgaagaatgaaagttcaccagttcaatctcctcgg
ggaaagataaggagccgtgaaaaatactcccctgttcgacatgctcctccagtaaaaact
gaggcgcataaaggatccagatcattggaacgtagacgtcctatttcttctaggtcacca
cagagggacatatatgaccgtaaggattcacgaaaaaaagagtcgcttttgcctcctcgg
cgacggaggtcaccatctgtttcagaatctccacgctccagatcggcctcagaatctcca
ccaacaaaaagggaaaggagtcctagtgaaaatagagggccaaggagtactttgaaccag
agggagagaaagacaattgacactgacagcccaaatcccgggaaattgagagaggataga
gttagttctaacatttctgagaaaattgcagatgagaaagaaatgaaccattcaagggag
gcctttgagcataaacctaggtcttcaagaaaaattccttcagcacctgattcaaataaa
gatcttggaaaggggcgggatgatgaagaattttctgaatttcatagccattcagatcgc
atggagtcaagaaagcaaaatgaagtgatgaagagtgaaaaatcttccgcaatgatggag
caaacaaaggaactggatcagcaaaagtcaccatcaagccatagacactctcattcagtt
aagagggaaagggaattatatgctggggagagcttcaaagcagagaaggaaaacctgtct
catgcaaactatatcaagggcaaagagctacttgagtcagaaactcccctcacttcatca
aggaaagttgagcagaatgatcaaagtggtgatgagggttctggttctgaggaaagtgaa
aagcgtagagctaaagttaaggaaaaaagaaagcataagaggtctggcaaatatgagtca
tcgtcagatgatagttatgactctgatgttgaggataggaaggaggctaaaaggaggagg
aaagaggagaggagatggaagaaagaggagaagcgtaagcggcgggaggagagacagcgc
agaaaggaagaaaggcatgcccagaaactaaaattgaagtcagctaatgccatgtcttcg
ccatcagatacggagagaaatcctgattgccatgcttcttatgatgagcatctgaggaag
ggggatgtcgaggagtcagagtccgtgcagaaaaggcttgagattgagctgcgggagaag
gctcttgaatctctcagagcaaaaaagggcatcagccattaa
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