Nicotiana attenuata (coyote tobacco): 109237757
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Entry
109237757 CDS
T05870
Name
(RefSeq) nuclear pore complex protein NUP214
KO
K14317
nuclear pore complex protein Nup214
Organism
nau
Nicotiana attenuata (coyote tobacco)
Pathway
nau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
nau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109237757
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nau03019
]
109237757
Messenger RNA biogenesis [BR:
nau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
109237757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lsr2
Motif
Other DBs
NCBI-GeneID:
109237757
NCBI-ProteinID:
XP_019259667
LinkDB
All DBs
Position
Unknown
AA seq
1719 aa
AA seq
DB search
MSTSIELEEEIEGDQIGSKNYRFSKIGTPVPLKPDESSSFDLENQSPPLQPLVISERFRL
LFIAHSDGFCVARTKEVMASAQEIKEKGSGPSIQELSIVDVTIGKVSVLALSGDDSLLAA
CVGNKIHFFPVSALLYKDQTPAFSHSVKDSSVITDMQWAKKAEKVYVGLSSDGKLYSGVG
QRPIKEVMDDVDAVGWSPDGEFVAVTRKNLISILSSKFEEKFSISLAFKSLLDDSNAKCI
IKVDAVRWIRPDCIIIGCLQVNDDDEEENYAVQVITSENGGITNPSAKPVVRSFRDVFLD
FRYDAVPLCSGRHLFLSYLDQHQLAFVANRKNLDQHILLFGWSVGDEKNEAATIEILNDN
WSPKIEAQDSGDDILILGLAIDKVSQNGEVKLLLGEEEKEVSPCCLLLCLTNDGRVSIFH
FASATAASAPPQSTDSEEKNDASIVASSQDVLVESSSAQKQIDQVDSGLQPHEIDRRHKI
VATNALSSAAVKFSSEEAIKARNQNQGANLEQSTSKTSVHVDAGRVSNFRTQETQKVAEV
KPGAFSFSGNSLGNFAIPTIGQSTGTGSVMELPGKIMSTGSSTASSLSSEHRISSKPDER
PSSTPFSGVQRKTFDFSDRNSSGSNETAGTSVSIDFFKQRALAGAGNIESLPAFPGSRFP
SQKGFVSEPLKPHLTRETCEGIPSKQFCDVEEMARKLDGLLEGIEGEGGFRDASIRAHRS
SVLALEEGIESVSEKCRIWRGVMDEQLGEIQLLLDKTVQVLARKVYMEGIFKQATDERYW
DLWNRQKLSSELELKRQHIKEVNKSLTSQLIELEKHFNTLELNKFGDTSGIQTSKRGFQS
RPGQPRHVQSLHSLRNTMTTQLAVAEQLSGSLSKLMTDLSIDSPAKGQNVRKELFETIGL
SYDGASYNSPVREKAVDTPFNKELSAFLAVKERSRRKQTSPMKSAEPETARRRRDSLDRN
WASFEPPKTTVKRIVLQVDRQKDIANRSSLSLDKKHHHSQMRERSATAQYNIFNASSTSS
QQLKSKGLHDMPAKQSTENPFFQWADGLPRHAAEMPPMGSPVSLVQHESQSTAVTSQYSS
IDTHNLAKERSGSSTIPLRDTVQTGGLKAIQQSENRMQQPNSSNPPAQTFTPIKLIETSN
AVGKPGITKPTIRDWKNAEVTSESTQFESSSSPNYSLPTATAGDSPFTLSSKVIHSEVVN
KSQVTESPFSSQASTWSSSSQVKIMPSASVSSSQEPMFSPISSTSFDSISKANMGSSQKV
SQSQSSAASMTQSSSLPSTQKLDSLPITPPLDGAKSESPTVSSLPSVAILDTKADRNSDR
PPSLANQSTKIDTPQDSASQPPVSVSVSNLQTGPSVQSKSTNEQSASLNSANQISSGGIS
SEILDVGLNTTPGQPFSASAISPPIATSSTGSAINVKSGSSDVVTHEDEMEEEAPESSQM
TENPLGNLAGFGIGTAATPVTAKPNPFGAVSPSKASSPANSLFTSTASGGELFRPASFSF
QPIQPPQPSASANFGAFPGSTSQAPAMGGFGQPAQIGQGQQALGSVLGTFGQSRQIGAGL
PGTGAASASSFGRGFASNNSAGGFGGGFSGVSSTGGGFASLASGGGGFTAAAPGGGFAAA
AAPGGGFGAAAAAPGGGFAAAATSAGGFAAAAATSAGGFAGAATAGGGFAAPTAVGSGFS
GGGFGAFSSQQSGGGGFPAFGGSSAAARPPSALFTQMRK
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttccatcgaattggaggaagagattgaaggagaccaaattggctccaaaaat
tatcgtttctccaaaatcggaacacccgtacctctaaagcccgacgagtcttcatccttc
gatctcgaaaaccaatctccgcctttgcaacctttagtcatctccgaacgctttcgactt
ctcttcattgcccactccgatgggttttgtgttgcgaggacaaaggaggttatggcatca
gcacaggagattaaggagaaaggtagtggtccatccatacaggaattgagcattgtggat
gttactattgggaaagtttcggtacttgccttgtctggagatgactccttgcttgctgct
tgtgttggcaataaaatccatttcttccccgttagcgcccttctatacaaggaccaaaca
ccagccttttctcattctgtcaaggattcaagtgtcatcacggatatgcaatgggctaaa
aaggcagaaaaggtttatgtcggtctctcaagtgatgggaagttgtatagcggggttggt
caaaggccgattaaagaagttatggacgatgttgatgctgttgggtggagtccggatggt
gagtttgttgctgtcacaaggaagaatttgattagcattctatcatcaaagtttgaggag
aagttcagcatatcactagcatttaagtcgctgcttgatgattctaatgcaaaatgcatc
atcaaagtggatgctgtcagatggattcgtcctgattgtattatcataggatgtcttcaa
gtaaatgatgatgatgaggaggaaaattatgcggtgcaagtcatcacaagtgagaatgga
ggaataactaacccttccgccaagccagttgtaaggtccttcagggatgtgtttctagac
ttccgttatgatgcagttcctttatgcagcggacgccatctcttcttgagttatttggat
caacatcagctggcatttgttgctaatcggaagaatctggatcagcacatcttgttgttt
ggatggtcagttggtgatgagaagaatgaagctgcaacaattgaaattttgaatgataat
tggtccccaaagattgaggctcaagacagtggtgatgatatcttgatcttgggacttgcc
attgacaaagtttcccaaaatggggaagttaaactgttgcttggtgaagaagaaaaagaa
gtttcaccgtgttgccttctgctttgtcttaccaatgatggaagggtgtcaattttccat
tttgctagtgctactgctgcttcagcgccaccccagtctactgattctgaagagaagaat
gatgcttctatagtggcatcgtcacaagatgtgctagttgaatcttccagcgctcagaag
caaatagatcaagtagattcagggctgcaacctcatgaaatagatagacgacataaaatt
gttgcaacgaatgctctatcatctgcagcggtgaagtttagctcagaagaagcgattaaa
gccagaaatcagaaccaaggtgcaaatttggaacagtccacatccaaaacatctgtacat
gtggatgctggacgtgtgagtaattttaggacgcaagaaactcaaaaagtagctgaagtt
aaacctggtgcattttctttctcaggaaattccttaggtaactttgccattcctacaatt
gggcagagtacgggaactggtagtgtcatggagttacctggaaagataatgtcaacaggt
tcctctactgcttcgtccctctcaagcgaacaccgcatttcttcaaaacctgatgaaaga
ccctcatccacaccattcagtggtgttcaaagaaaaacttttgatttttctgatagaaat
tcttctggctcaaatgagacagctggaacttcagtatcaattgattttttcaagcagcga
gccttggcaggtgcagggaatattgagtcattacctgcttttcccggctcaaggtttccg
tcacagaaaggttttgtatcggagcctttgaagcctcacttgaccagggagacttgtgag
ggaattccatcaaagcaattctgcgatgttgaggagatggccaggaaattggatggtctt
ctagaaggtatagaaggtgaaggtgggtttagagatgcttccattcgtgctcacaggagt
tcagttttggcattggaggaaggcatagagagtgtttctgagaaatgcaggatatggaga
ggggtaatggatgagcaacttggcgagatacagcttctccttgataagacagtacaagtt
ttggcgaggaaagtatacatggaaggaatatttaagcaagctactgatgaacggtactgg
gatctctggaatcgccagaaattaagttctgaactggagttaaagaggcaacatataaag
gaagttaataagagcttaaccagccagctgattgaattggaaaaacattttaacacactt
gagttgaataagtttggtgacactagcgggatacaaacaagtaaaagaggtttccagagc
aggcctggacaacccaggcatgtccagtccttgcacagtttacgtaatacaatgactaca
caactagcagtagcagagcagctctctggaagtctctcgaaactgatgactgatttgagc
atagattctcctgcaaaaggtcagaatgttaggaaggaattatttgagacaattggtcta
tcctatgatggtgcctcttacaactctccagttagggaaaaggctgtagatacacctttt
aacaaagaattatcagcatttcttgctgttaaagagcgatccaggagaaagcaaacgagc
cctatgaagagcgctgaaccagagacagcaaggagacgccgtgactcacttgatcggaat
tgggctagcttcgaacctccaaaaacaacagtgaaaaggattgtcctgcaagtagatcgc
cagaaggatattgcaaataggtcatctttgtcactggataagaaacatcaccattctcag
atgcgagaaagatcagcgactgctcaatataatatctttaatgcctcttccacctcctca
cagcaacttaaaagcaaaggtcttcatgatatgccagcaaagcagtccactgaaaatcct
tttttccaatgggctgatggacttccaagacatgcagctgaaatgccaccaatgggttct
ccagtatctttagtgcagcatgaatcacagtcaaccgcagtcactagccaatatagttca
atagatactcacaaccttgctaaggaaagatcaggtagcagcacgatacctcttagagat
actgtgcaaacaggtggactgaaggccattcagcaatctgagaatagaatgcagcagcca
aactcatcaaatcctcctgcacagacatttaccccaatcaagttaattgagacttcaaat
gcagttggtaaacctggaatcaccaaacctacaatcagagattggaagaatgcagaggtg
actagtgaaagcacgcagtttgaatctagcagtagtcctaactattccttgcccactgca
actgctggtgattctcccttcactctatcttcgaaggtcatacactctgaagttgtgaat
aagagccaggttactgagagtccattttcttcccaagcatcaacatggagttcctcgtca
caagtaaaaatcatgccatcagcatctgtgtcttcttcacaagagccaatgttttcacca
atatcatctacatcatttgattccatttctaaagccaatatgggttctagtcaaaaggtc
tctcaatctcaatcatcagctgcttccatgacgcagtcttcatctcttccgagcactcaa
aagttggattccttacccattacccctcccttggatggtgcaaagtctgagtctccaaca
gtctcgtctctgccttcggttgccatacttgatacgaaggctgataggaattccgacaga
ccaccttcacttgcgaatcaaagtacgaagattgatacaccacaagattcagcttcacag
cctccggtatctgtcagcgtatctaatttacaaactggaccttcggtccagtcaaaatcc
actaacgaacaatcagccagtttaaattctgcaaatcagatcagttctggtgggatatca
agcgaaatcttagatgtgggcttgaatactacaccgggacagccattttctgcttctgcc
atttcaccaccaatagcgacatcaagtactggtagtgcaattaatgtgaaaagtggtagt
tcagatgttgtcacccatgaggatgagatggaagaagaagctccggagagtagtcagatg
actgagaatccacttggaaacctggctgggtttggtattgggactgctgctactccagtt
actgcgaaacctaatccatttggtgcagtatcacccagtaaagcttcatctccggcaaat
tccttatttacaagtacagcttcaggcggtgagctatttcgaccagcatcgtttagtttc
caaccaatacagccaccccaaccgtcagcatctgcaaattttggtgcttttcctggttcc
acgagtcaagctcctgcgatgggtgggtttggccagccggctcagattggacaagggcag
caagctttaggatcagttcttggtacttttggacaatcaaggcagattggtgctgggcta
cccggaactggtgcggcatctgcaagctcttttgggaggggttttgcaagcaataactct
gctggtggttttggaggcgggttttctggagtttcttctactggtggtgggtttgccagt
ctggcttctggtggtggtggattcactgctgctgctcccggtggtggatttgctgccgct
gctgcacctggtggtggattcggtgctgctgctgctgctcccggtggtggatttgctgcc
gctgccacatctgctggtggatttgctgctgctgctgccacatctgctggtggatttgca
ggtgctgccacagctggtggtggatttgctgctccaacagctgttggttcaggcttttca
ggcggtggttttggagcttttagcagccaacaaagtggtggcggtggcttccctgcattt
ggtgggagttcagctgctgcaagaccaccttctgcactcttcacgcagatgagaaagtag
DBGET
integrated database retrieval system
