KEGG   Natronorubrum bangense: DV706_14495
Entry
DV706_14495       CDS       T05942                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
nbg  Natronorubrum bangense
Pathway
nbg03030  DNA replication
nbg03410  Base excision repair
nbg03420  Nucleotide excision repair
nbg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DV706_14495
   03410 Base excision repair
    DV706_14495
   03420 Nucleotide excision repair
    DV706_14495
   03430 Mismatch repair
    DV706_14495
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nbg03032]
    DV706_14495
   03400 DNA repair and recombination proteins [BR:nbg03400]
    DV706_14495
Enzymes [BR:nbg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     DV706_14495
    6.5.1.6  DNA ligase (ATP or NAD+)
     DV706_14495
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     DV706_14495
DNA replication proteins [BR:nbg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    DV706_14495
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     DV706_14495
DNA repair and recombination proteins [BR:nbg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DV706_14495
   NER (nucleotide excision repair)
    Other NER factors
     DV706_14495
   MMR (mismatch excision repair)
    Other MMR factors
     DV706_14495
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: QCC55573
UniProt: A0A4D6HNM1
LinkDB
Position
complement(2874569..2876308)
AA seq 579 aa
MEFATFADRVAAIDAESADLEIIAHVRELLEDAGDDLAVVARFVQGRVFPAWQSTTLDIG
PNTCYEAIARAAGTNVSADDVEERLAEVGEIGEVAAGYDFGGQQGLGAFTAGGTSDALTV
REVFETLVDLAATSGSGSHDTKVDLLFGLFNRCESAEARYLARLVLSEMRIGVGEGAVRD
AISEAFDVPGERVERALQVSNDYGQVARVARDDGLEGLDAMDLEVGRPVQAMLAQAGTVT
DALEEWDEAAVEWKYDGARVQLHHDPENGTDAAETRVFSRNMEDVTNALPEVVEFAEHTL
EEPAILDGEVVAVDDDGTPLPFQEVLKRFRRKHDVAKAREDVEVRPVFFDCLHAGGDDLL
AESLTTRHERLEGLLADDPDQEPESVDGLSLLWRTDDPDEIESIDAKALEGGHEGIMLKD
PDSTYSPGRRGKHWRKRKPDVETLDCVVTGAEWGEGRRATFLGTFELSVRADDGGERRSA
DAAVDSQNLATVGKVATGITDEKLEELTELLEPHLASEDGQEVDLEPEIVFEVGYEEIQT
SPTYSSGYALRFPRFQAVRHDKDPRDADSLERLERLREV
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggagttcgccacgttcgccgaccgtgtcgctgcgatcgacgccgaatccgcggacctc
gagatcattgcccacgtcagggagctgctcgaggacgcaggcgatgacctcgcagtcgtc
gcccggttcgtgcaaggccgggtgtttccggcctggcagtcgacgacgctcgatatcggt
ccgaacacctgttatgaggcgatcgctcgcgcggcggggacgaacgtcagcgccgacgac
gtcgaggaacggctcgccgaggtcggcgagatcggcgaggtggcagccggctacgatttc
ggtggccagcaagggctgggggcgttcactgcaggcgggacgagcgacgcgttgaccgtc
cgtgaggtcttcgagacgctcgttgatctcgccgctacttcgggttcgggcagtcacgac
acgaaagtcgatctcctctttggcctgttcaaccgctgtgaaagcgcggaagcccggtat
ctcgcccgcctcgtcctctctgagatgcgtatcggtgtcggcgagggtgccgttcgcgac
gccatcagcgaggccttcgacgtgccgggcgaacgcgtcgaacgcgcgctgcaggtgtcg
aacgactacggccaggtcgctcgagtcgcccgtgacgacggtctcgaggggctggacgcg
atggacctcgaggtcggccggcccgtccaggcgatgctcgcacaggctggaaccgtcacc
gacgcactcgaggagtgggacgaggcggccgtcgagtggaagtacgacggggctcgcgtt
cagttgcaccacgatcccgaaaacggcacagacgcggctgaaacccgtgtcttctcacgc
aacatggaggacgttaccaacgccttaccggaggtcgtcgagttcgccgaacacacactc
gaggagccggcaattctcgacggcgaggtcgtcgccgtcgatgacgacggcacgccgctg
ccgtttcaggaagtcctcaagcgcttccggcgcaaacacgacgtcgcgaaggcccgggaa
gacgtcgaggtccggcccgttttcttcgactgtctgcacgccggtggcgacgacctgctc
gccgagtcgctgacgacgcgccacgagcgactcgagggcctcctcgccgacgacccggat
caagagcccgaatccgtcgacggtctctctttgctctggcgcaccgacgaccccgacgag
atcgagtcgatcgatgccaaggccctcgagggcggtcacgaggggatcatgctcaaagat
cccgactcgacgtactcgccgggtcgacgcgggaaacactggcggaaacgcaagcccgac
gtcgagacgctcgactgcgtggtaacgggtgcggagtggggcgaagggcggcgggcgacg
ttcctcggtacgttcgaactctccgtgcgcgcggacgacggcggagaacgacgttccgcc
gacgctgcggtggactcgcaaaatctagcgaccgtcgggaaggtcgcgaccggaatcacc
gacgagaaactcgaagaactgaccgagttactcgagccccacctcgcaagcgaggacgga
caggaggtcgatctcgagcccgaaatcgttttcgaggtcggctacgaggagatccagacc
tcgccgacgtactcgtcgggctacgcactgcgatttccgcggttccaggctgtacgccat
gacaaggacccgagagatgccgactcgctcgagcgactcgagcggctccgggaggtctga

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