Nocardioides sp. JS614: Noca_0197
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Entry
Noca_0197 CDS
T00443
Name
(GenBank) alpha amylase, catalytic region
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
nca
Nocardioides sp. JS614
Pathway
nca00500
Starch and sucrose metabolism
nca01100
Metabolic pathways
nca01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Noca_0197
Enzymes [BR:
nca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
Noca_0197
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Big_7
DUF5696
Motif
Other DBs
NCBI-ProteinID:
ABL79742
UniProt:
A1SD57
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All DBs
Position
complement(209959..212736)
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AA seq
925 aa
AA seq
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MRQLISAPLVLAGAMTLGVTLAAPAGAAAPARADGPGHRPSAYAQHAPRPGVTDEDFYFV
MGDRFENGDPDNDRGGLTGDRLTTGFDPAAKGFYNGGDLDGLRSRLDYIQGLGTDSIWLT
PIFKNKPVQLEDGPSAGYHGYWITDFTTVDPHLGTNQDLADLVDAAHDRGMKVYFDIITN
HTADVIGYEEGDRTAYVSKDAVPYRDAAGNPFDDRDYAGTSQFPVLDPATSFPYTPVLDA
GEQDLKVPAWLNDLTNYHNRGNTTFSGEDSQYGDFFGLDDLFTEKPAVVDGMIDIYRTWV
EDFDIDGFRIDTMKHVDDAFWQRFGPTMQQLAAADGNPGFFMFGEVALDGSDAAAKAFTS
RYTTTDRMQAVLDFPFQDAARGFASKSLDSDRLARFFRNDDWYTDADSNAYSLPTFLGNH
DMGRIGHFLEADNPGADDAELVARDRLAHELMYLSRGNPVVYYGDEQGFTGDGGDQLARQ
TMFASQVPEYRDDDQIGTDRTGADDNFVTDAPLYRAIRDLADLTERDPALRDGAQQVRYS
SPGAGLFAFSRVDREHRVEYVVALNNSEQADSGRVPTYLKKGEFRKVYGPGPARLVSRAD
RGLDVALPALSTSVYRSVDRIPRAERAPQISVARPVPSSIAHGRMHVRAKVSGSSFYEVT
FQRRIGDGAWQTIGVDDNAPYQVFDDVADQTPGTAVSYRAAVLDNAGHTRGSRARTTAVP
RTSVVVTGPADGGTVSVVDPVTVTASVDPERPLQSVAFERSVGDGPWTSLGTDSSAAAYT
VTDDVSDLPLGTEVRYRATLSEAGVVQGTSAPVRVTTAEPAPAVDSVTVAGSLQSELGCP
EDWQPGCAATHLTFDRTDGRWHGTFTVPAGDYEWKVAINDSWDVNYGAGGAAGGSNLALP
VPAGGATYVFTWDQVSHEPSVAPAG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaactgatttccgcaccgctcgtcctcgcgggggccatgaccctcggcgtcacc
ctcgcggccccggccggcgccgcggctcctgcacgagcggacgggccgggccaccgcccc
tcggcgtacgcccagcacgccccgcgccccggtgtcaccgacgaggacttctacttcgtc
atgggcgaccggttcgagaacggcgacccggacaacgatcgcggcggcctcaccggcgac
cggctcaccaccggcttcgacccggccgccaaggggttctacaacggcggggacctggac
gggctgcgctcccggctggactacatccagggcctcggcaccgactcgatctggctgacg
ccgatcttcaagaacaagccggtccagctcgaggacggaccgtcggccggctatcacggc
tactggatcaccgacttcaccaccgtcgacccgcacctgggcaccaaccaggacctcgcc
gacctcgtggacgccgcccacgaccgggggatgaaggtctacttcgacatcatcaccaac
cacacggccgacgtgatcggctacgaggagggcgaccgcacggcgtacgtctccaaggac
gcggtgccctaccgcgacgccgccggcaaccccttcgacgaccgcgactacgccggcacc
tcgcagttcccggtgctggacccggccacgtccttcccgtacaccccggtgctcgacgcg
ggcgagcaggacctcaaggtgccggcctggctcaatgacctgacgaactaccacaaccgc
ggcaacacgacgttctccggcgaggacagccagtacggcgacttcttcggcctcgacgac
ctgttcaccgagaagccggcggtggtcgacgggatgatcgacatctaccgcacctgggtc
gaggacttcgacatcgacggcttccggatcgacacgatgaagcacgtcgacgacgcgttc
tggcagcggttcggtccgaccatgcagcagctcgccgcggccgacggcaaccccgggttc
ttcatgttcggagaggtcgccctcgacggcagcgacgccgccgccaaggcgttcacctcg
cgctacaccaccaccgatcggatgcaggcggtgctggacttcccgttccaggacgccgcc
cgggggttcgcgtcgaagagcctcgacagcgacaggctggcgcggttcttccgcaacgac
gactggtacacggacgcggactcgaacgcctactcgctgccgaccttcctcggcaatcac
gacatgggccggatcgggcacttcctggaggccgacaaccccggcgccgacgacgccgaa
ctggtggcgcgcgaccggctggcccacgagctgatgtacctctcccggggcaacccggtc
gtctactacggcgacgagcagggcttcaccggcgacggcggggaccagctcgcccggcag
acgatgttcgccagccaggtgccggagtaccgggacgacgaccagatcggcaccgaccgc
accggcgccgacgacaacttcgtcaccgacgccccgctgtaccgagcgatccgggacctc
gccgacctgaccgagcgggacccggccctgcgcgacggggcgcagcaggtccgctactcc
tcgccgggcgccgggctgttcgcgttctcgcgggtcgaccgcgagcatcgggtcgagtac
gtcgtggcgctgaacaacagcgagcaggccgactcggggcgggtgccgacgtacctcaag
aagggcgagttccggaaggtgtacgggccggggccggcccgcctggtgagccgcgcggac
cggggcctggacgtcgcgctcccggcgctgtcgacctccgtctaccgctcggtcgaccgg
atcccccgcgccgagcgcgctccgcagatctcggtggcccggccggtgccgtcgtcgatc
gcgcacggccggatgcacgtgcgggccaaggtgtcgggctcctcgttctacgaggtgacc
ttccaacgccgcatcggcgacggtgcctggcagacgatcggggtcgacgacaacgcgccg
taccaggtgttcgacgacgtcgccgaccagaccccggggacggccgtgagctatcgggcc
gccgtgctcgacaacgccgggcacacccgcgggtcccgggcccgcaccaccgcggtgcca
cggacctccgtggtggtgacgggcccggccgacggcggcacggtcagcgtggtcgacccg
gtgaccgtgaccgcctcggtcgacccggagcggccgctgcagtcggtggcgttcgagcgc
agcgtcggcgatgggccctggacgagcctgggcaccgacagctccgctgcggcctacacc
gtgaccgacgacgtgtcggacctgccgctcggcaccgaggtgcgctaccgggccacgctc
agcgaggccggcgtcgtgcagggcacgagcgccccggtcagggtgaccaccgccgagccc
gcgccggcggtcgactcggtgacggtcgccggcagcctgcagtccgagctcggctgcccc
gaggactggcagcccggctgcgctgccacgcacctgaccttcgatcgcaccgacgggcgc
tggcacggcaccttcaccgtgcccgccggcgactacgagtggaaggtcgcgatcaacgac
tcctgggacgtcaactacggtgcgggtggcgccgccggcggcagcaacctcgccctcccg
gtcccggccggtggcgcgacgtacgtgttcacctgggaccaggtcagccacgagccctcg
gtcgcaccagccggctga
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