Nocardioides sp. JS614: Noca_1234
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Entry
Noca_1234 CDS
T00443
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
nca
Nocardioides sp. JS614
Pathway
nca03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
Noca_1234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nca03400
]
Noca_1234
DNA repair and recombination proteins [BR:
nca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
Noca_1234
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GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
ABL80748
UniProt:
A1SG13
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Position
complement(1310489..1311484)
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AA seq
331 aa
AA seq
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MRAIWKGAVSFGLVSVPVKLYAATESHDVSFRQVHAKDGGRIKYQRVCSLDGEEVAYADI
AKGYETEDGEMVVLTDDDMAELPSTSSREIAVEKFVPSEQIDPMLFEKSYYLEPEKSGAK
PYALLRQALLDADRMAVVTVALRQRTTVGVLRVKDADNGQVIVLQTMMWPDEIRTPDFVV
DAGEVKPAEVKMANMLVETLAGDFDPAEFEDDYAEAVEALVKAKVEGGEVKRTPTSTKSS
GEVVDLLAALQRSVDAAKSARGEETAAGPRDDSEEEAEDQTEPTKKTAAKKSAAKRAPAK
KTAAKKSAATKAATKAPAKKAAKKAPARKAS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgcgatctggaagggcgcggtgtcgttcgggctcgtcagcgtgcccgtgaagctg
tacgccgcgacggagtcccacgacgtctcgttccggcaggtgcatgccaaggacggcggg
cggatcaagtaccagcgggtgtgctcgctggacggcgaggaggtcgcctacgccgacatc
gccaagggctacgagaccgaggacggcgagatggtggtcctcaccgacgacgacatggcc
gagctgccgtcgacgtcgtcgcgcgagatcgcggtcgagaagttcgtgccgtccgagcag
atcgacccgatgctgttcgagaagtcctactacctcgagccggagaagtccggcgccaag
ccctacgcgctgctgcgccaggcgctgctcgacgccgaccggatggcggtcgtcacggtc
gcgctccgccagcgcaccacggtcggcgtgctgcgggtgaaggacgccgacaacggacag
gtgatcgtgctgcagaccatgatgtggcccgacgagatccgcaccccggacttcgtggtg
gacgccggcgaggtcaagccggccgaggtcaagatggcgaacatgctggtcgagacgctg
gccggggacttcgacccggcggagttcgaggacgactatgccgaggcggtcgaggcgctg
gtgaaggccaaggtcgagggcggcgaggtcaagcgcacaccgacgtcgaccaagtcctcc
ggcgaggtcgtcgacctgctcgccgcgctgcagcgctcggtggacgccgcgaagtccgcc
cgcggcgaggagaccgcggccggtccccgggacgactccgaggaggaggccgaggaccag
accgagcccacgaagaagaccgccgccaagaagtcggcggcaaagagggcacccgcgaag
aagaccgccgccaagaagtcggcggccacgaaggccgccacgaaggcacccgccaagaag
gccgccaagaaggcaccggcccgcaaggccagctga
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