KEGG   Nocardioides sp. JS614: Noca_1234
Entry
Noca_1234         CDS       T00443                                 
Name
(GenBank) DNA end-binding protein Ku
  KO
K10979  DNA end-binding protein Ku
Organism
nca  Nocardioides sp. JS614
Pathway
nca03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:nca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Noca_1234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nca03400]
    Noca_1234
DNA repair and recombination proteins [BR:nca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Noca_1234
SSDB
Motif
Pfam: Ku HC2
Other DBs
NCBI-ProteinID: ABL80748
UniProt: A1SG13
LinkDB
Position
complement(1310489..1311484)
AA seq 331 aa
MRAIWKGAVSFGLVSVPVKLYAATESHDVSFRQVHAKDGGRIKYQRVCSLDGEEVAYADI
AKGYETEDGEMVVLTDDDMAELPSTSSREIAVEKFVPSEQIDPMLFEKSYYLEPEKSGAK
PYALLRQALLDADRMAVVTVALRQRTTVGVLRVKDADNGQVIVLQTMMWPDEIRTPDFVV
DAGEVKPAEVKMANMLVETLAGDFDPAEFEDDYAEAVEALVKAKVEGGEVKRTPTSTKSS
GEVVDLLAALQRSVDAAKSARGEETAAGPRDDSEEEAEDQTEPTKKTAAKKSAAKRAPAK
KTAAKKSAATKAATKAPAKKAAKKAPARKAS
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcgtgcgatctggaagggcgcggtgtcgttcgggctcgtcagcgtgcccgtgaagctg
tacgccgcgacggagtcccacgacgtctcgttccggcaggtgcatgccaaggacggcggg
cggatcaagtaccagcgggtgtgctcgctggacggcgaggaggtcgcctacgccgacatc
gccaagggctacgagaccgaggacggcgagatggtggtcctcaccgacgacgacatggcc
gagctgccgtcgacgtcgtcgcgcgagatcgcggtcgagaagttcgtgccgtccgagcag
atcgacccgatgctgttcgagaagtcctactacctcgagccggagaagtccggcgccaag
ccctacgcgctgctgcgccaggcgctgctcgacgccgaccggatggcggtcgtcacggtc
gcgctccgccagcgcaccacggtcggcgtgctgcgggtgaaggacgccgacaacggacag
gtgatcgtgctgcagaccatgatgtggcccgacgagatccgcaccccggacttcgtggtg
gacgccggcgaggtcaagccggccgaggtcaagatggcgaacatgctggtcgagacgctg
gccggggacttcgacccggcggagttcgaggacgactatgccgaggcggtcgaggcgctg
gtgaaggccaaggtcgagggcggcgaggtcaagcgcacaccgacgtcgaccaagtcctcc
ggcgaggtcgtcgacctgctcgccgcgctgcagcgctcggtggacgccgcgaagtccgcc
cgcggcgaggagaccgcggccggtccccgggacgactccgaggaggaggccgaggaccag
accgagcccacgaagaagaccgccgccaagaagtcggcggcaaagagggcacccgcgaag
aagaccgccgccaagaagtcggcggccacgaaggccgccacgaaggcacccgccaagaag
gccgccaagaaggcaccggcccgcaaggccagctga

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