Nocardioides sp. JS614: Noca_1747
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Entry
Noca_1747 CDS
T00443
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nca
Nocardioides sp. JS614
Pathway
nca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Noca_1747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nca03021
]
Noca_1747
03019 Messenger RNA biogenesis [BR:
nca03019
]
Noca_1747
Transcription machinery [BR:
nca03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Noca_1747
Messenger RNA biogenesis [BR:
nca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Noca_1747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
NACHT
Motif
Other DBs
NCBI-ProteinID:
ABL81260
UniProt:
A1SHH5
LinkDB
All DBs
Position
1857894..1859630
Genome browser
AA seq
578 aa
AA seq
DB search
MKKAQLVEAIKAHQSGGRPAKERGEQQQAQQERSEQQRTQPEQAPQERTQPERPQQQRSE
EQPRRDQRPDEAQRDQQRDQQRERNRGQGQGNHDQKQDQNKQGQPKRQDQKQAQNKQDQK
QDQGKQDQKQDQGHQDQDHHDQGHQDQGHQDQGRAGEDQGEGSRRNRRRRGRDRDRTGRG
VTGGGQRNEPDTTILEDDVLVPAAGILDVLDNYAFVRTSGYLPGPDDVYVSLSMVRKFGL
RRGDALVGQVRQPREGERKEKFNPMVRIDSVNGADPEIAKGRVDFAKLTPLYPSERLRLE
TEPTNLIGRVIDIAAPIGKGQRGLIVSPAKAGKTMIMQSIANSITTNNPECHLMVVLVDE
RPEEVTDFERSVKGEVISSTFDRPASDHTMVAELAIERAKRLVELGHDVVVLLDGITRLG
RAYNLAMPASGRILSGGVDSAALYPPKKFFGAARNIENGGSLTILATALIESGSKMDEVI
FEEFKGTGNMEIRLRRDLADKRLFPAIDAVQSGTRREELLMSKEELAIVWKLRRVLSGLD
GQQALELLLERLKKSQTNIEFLMQVQKTTPTPTGGRED
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaggctcagctggtcgaggcgatcaaggcccaccagagcggcggccggccggcc
aaggagcgcggcgagcagcagcaggcccagcaggagcggagcgagcagcagcggacccag
ccggaacaggccccgcaggagcggacccagccggagcgaccgcagcagcagcggtcggag
gagcagccgcggcgcgaccagcggcccgacgaggcccagcgggaccagcagcgggaccag
cagcgcgagcgcaaccgcggccagggtcaggggaaccacgaccagaagcaggaccagaac
aagcagggccagcccaagcggcaggaccagaagcaggcccagaacaagcaggaccagaag
caggaccagggcaagcaggaccagaagcaggaccagggtcaccaggatcaggaccatcac
gaccagggacaccaggaccaggggcaccaggaccagggccgggcgggcgaggaccagggt
gagggcagtcgccgcaaccggcggcgtcgcggtcgcgaccgtgaccgtaccggtcggggg
gtcaccggcggtggtcagcgcaacgagccggacaccacgatcctcgaggacgacgtcctg
gtgccggccgcgggcatcctcgacgttctcgacaactacgcgttcgtgcggaccagcggc
tacctccccggccctgacgacgtgtacgtgtcgctctcgatggtgcgcaagttcgggctg
cgccgcggcgacgcgctcgtcgggcaggtgcgccagccccgggagggcgagcgcaaggag
aagttcaacccgatggtccgcatcgacagcgtcaacggcgccgatccggagatcgcgaag
gggcgggtcgacttcgccaagctgaccccgctctacccctccgagcggttgcggctggag
accgagccgacgaacctgatcggtcgggtcatcgacatcgcggccccgatcggcaagggc
cagcgcggcctgatcgtgtccccggcgaaggccggcaagaccatgatcatgcagtcgatc
gcgaactcgatcaccaccaacaaccccgagtgccacctgatggtggtgctggtcgacgag
cggcccgaggaggtcaccgacttcgagcgctcggtcaagggtgaggtcatctcctcgacc
ttcgaccgtccggccagcgaccacacgatggtcgccgagctcgccatcgagcgggccaag
cggctggtcgagctcggccacgacgtcgtcgtactgctcgacggcatcacccggttgggg
cgcgcctacaacctcgcgatgccggcgagcggccggatcctctccggtggtgtggactcg
gccgcgctctacccaccgaagaagttcttcggtgcggcgcgcaacatcgagaacggcggc
tcgctgaccatcctcgccacggccctgatcgagagcggctcgaagatggacgaggtgatc
ttcgaggagttcaagggcaccgggaacatggagatccggttgcgccgcgaccttgccgac
aagcgactgttccccgcgatcgacgcggtccagtccggcacccgccgcgaggagctcctg
atgagcaaggaggagctggccatcgtctggaagctgcgccgggtgctctccgggctcgac
ggccagcaggcgctcgagctcctgctggagcggctgaagaagtcccagaccaacatcgag
ttcctgatgcaggtccagaagacgaccccgaccccgaccggcgggcgcgaagactga
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