KEGG   Sciurus carolinensis (gray squirrel): 124963067
Entry
124963067         CDS       T08117                                 
Name
(RefSeq) peroxisome biogenesis factor 10
  KO
K13346  peroxin-10
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    124963067
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ncar04121]
    124963067
Ubiquitin system [BR:ncar04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Peripheral membrane proteins
    124963067
SSDB
Motif
Pfam: Pex2_Pex12 zf-RING_2 zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX zf-C3HC4_2 Prok-RING_4 zf-RING_5 zf-rbx1 zf-C3HC4_4 zf-RING_4 zf-ANAPC11 DUF3290 zf-RING_6
Other DBs
NCBI-GeneID: 124963067
NCBI-ProteinID: XP_047378478
EnsemblRapid: ENSSCRG00010000459
LinkDB
Position
1:207834728..207845755
AA seq 338 aa
MGGLLVRGRGVSDMARVAAPPEVIRAAQKDEYYLGGLRSAAGGALHSLAGAKKWLEWRKE
IELLSDIAYFGLTTLAGYQTLGEEYVGIVQVDPSQRHVPSRLRRCVLVTLHAVLPYLLDK
ALLPLEQELQAEGDSMRPSQGSLVPSGRGRSGTRRWVRRHTASLTEQQRRTLQRATFILR
QGLACLHRLHIAWFYIHGTFYHLAKRLTGITYLRTHHLLGEDPRARAHYRLLGLISLLHL
ALSVGLQVYSFRQRRRARKEWRLHRNLSHRRSSLEDRAVSRAPLCTLCLEERRHATATPC
GHLFCWECITEWCSTKAQCPLCREKFPPQKLVYLRHYR
NT seq 1017 nt   +upstreamnt  +downstreamnt
atgggcggcctgctagtgcgaggtcgcggagtttcggacatggcgcgggttgccgccccc
ccggaggtgatccgcgcggcgcagaaggacgagtactacctcggcggcctgcgaagcgcg
gcgggtggcgccctgcacagcctggcgggtgcaaagaagtggttggagtggaggaaagag
attgagctgctctcagacattgcctactttggcctcacaacacttgcaggctaccagacg
cttggggaggaatatgtgggcatcgtccaggtggacccatcccagcggcatgtgccctct
aggctccgccgctgcgtgctggtgacacttcatgcagtcctgccctacctgctggacaag
gccctgctgcccctggagcaggagttgcaggctgaaggtgacagcatgcgaccctcacag
ggtagcctggtgcccagtgggcgtggccggtcagggacacgacgatgggttcgtcgccac
acggctagcctgacagagcaacagaggaggacacttcagcgggccactttcatccttaga
cagggcctcgcctgcctccatcgcctccacatagcctggttttacatccatggcactttc
taccacctggccaagagactcacggggatcacttatctgcggacccaccacctgctggga
gaggacccacgggcacgcgcacactacaggttgctggggctcatctccctgctgcacctg
gcgctctccgtggggctacaggtgtacagcttcaggcagaggcggcgagccaggaaggag
tggaggctgcaccgcaacctgtcccaccgcaggagctccctggaagacagagccgtgtcc
cgagcacccctgtgcaccctgtgcctggaggagcgcaggcacgcgacagccacaccctgc
ggccacctcttctgctgggagtgcatcactgagtggtgcagcaccaaggcacagtgtccc
ctctgcagggagaagttccctccccagaaactggtctacctgaggcactaccgctga

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