Sciurus carolinensis (gray squirrel): 124964295
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Entry
124964295 CDS
T08117
Name
(RefSeq) ubiquilin-1 isoform X1
KO
K04523
ubiquilin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04141
Protein processing in endoplasmic reticulum
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124964295
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124964295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124964295
03051 Proteasome [BR:
ncar03051
]
124964295
Membrane trafficking [BR:
ncar04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
124964295
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
124964295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
YukD
Rad60-SLD_2
Ubiquitin_5
Dsc3_N
HOIP-UBA
CUE
ATG8
Motif
Other DBs
NCBI-GeneID:
124964295
NCBI-ProteinID:
XP_047380262
EnsemblRapid:
ENSSCRG00010017988
LinkDB
All DBs
Position
14:complement(84203944..84250991)
Genome browser
AA seq
589 aa
AA seq
DB search
MAESGESGGPPGSQDSAAAAEGAGAPAAAASAEPKIMKVTVKTPKEKEEFAVPENSSVQQ
FKEEISKRFKSHTDQLVLIFAGKILKDQDTLSQHGIHDGLTVHLVIKTQNRPQDHSTQQT
NTTGSNVTTSSAPNSNSTSGSATSNPFGLGGLGGLAGLSSLGLNTTNFSELQSQMQRQLL
SNPEMMVQIMENPFVQSMLSNPDLMRQLIMANPQMQQLIQRNPEISHMLNNPDIMRQTLE
LARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMLSAAQEQFGGNPFASLV
SNTSSGEGSQPSRTENRDPLPNPWAPQASQGSSASSGTTNTVSGTSGSAASGTSGQSTTG
PNLVPGVGASMFNTPGMQSLLQQITENPQLMQNMLSAPYMRSMMQSLSQNPDLAAQMMLN
NPLFAGNPQLQEQMRQQLPTFLQQMQNPDTLSAMSNPRAMQALLQIQQGLQTLATEAPGL
IPGFTPGLGALGNTGGSSGTNGSSTTPSENTSPTSGTTEPGHQQFIQQMLQALAGVNPQL
QNPEVRFQQQLEQLSAMGFLNREANLQALIATGGDINAAIERLLGSQPS
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggccgagagtggtgaaagcggcggtcctccgggctcccaggacagcgctgccgcggct
gaaggtgccggcgctcccgcggccgctgcctccgccgagcccaagatcatgaaagtcacc
gtaaagaccccgaaggagaaggaggagttcgctgtgcccgagaacagctcggtccagcag
ttcaaggaagaaatctctaaacgttttaaatcacatactgaccaacttgtgttgatattt
gctggaaaaattttaaaagatcaagatactttgagtcagcatggaattcatgatggactt
actgttcaccttgtcatcaaaacacaaaacaggcctcaagaccattcaactcagcaaaca
aataccacaggaagcaatgttaccacctcatcagctcctaatagtaactccacatctggt
tctgctactagcaacccttttggtttaggtggccttggaggacttgcaggtctgagtagc
ttaggtttgaatactaccaacttctctgaactacagagccaaatgcagcgacaacttttg
tccaaccctgaaatgatggtccagatcatggaaaatcccttcgtccagagcatgctctca
aatcctgacctaatgaggcagttaattatggccaatccacaaatgcagcagttgatacag
agaaatccagaaattagtcatatgctgaataatccagatataatgagacaaacattggaa
cttgccaggaatccagcaatgatgcaggaaatgatgagaaaccaggaccgagccttgagc
aaccttgaaagtattccaggaggatataatgctttacggcgcatgtacacggacattcag
gaacctatgctgagtgctgcacaagagcagtttggtggtaatccatttgcttccttagtg
agcaatacatcctcaggtgaaggcagtcaaccttctcgtacagaaaatagagatccctta
cccaatccatgggctccacaggcttcccagggctcatcagcttctagtggcactacgaac
actgtgagtggcacttctggtagtgctgccagtggcacttctggacagagtactactggg
ccaaatttggtgcctggagtaggagctagtatgtttaacacaccaggaatgcagagcttg
ttgcaacaaataactgaaaacccacagcttatgcaaaacatgttgtctgctccctatatg
agaagtatgatgcagtcactaagccagaatccagatcttgctgctcagatgatgctgaat
aatcccttatttgctggaaatcctcagcttcaagaacaaatgagacaacagctcccaact
ttcctccaacaaatgcagaatcctgatacactgtcagcaatgtcaaaccccagagcaatg
caggccttgttacagattcagcagggtttacaaacattagcgacggaagcccctggcctc
atcccaggatttactcctggcctgggggcattaggaaacactggaggctcttcaggaacc
aatgggtctagcactacacctagtgaaaacacaagccccacatcaggaaccactgaacct
ggacaccagcaatttattcaacaaatgctgcaggctcttgctggagtaaatcctcagcta
cagaatccagaagtccgatttcagcaacaactggaacagctcagtgcaatgggatttttg
aaccgtgaagcaaacttacaagcactaatagcaacaggaggtgatattaatgcagctatt
gaaaggttactgggttcccagccatcatag
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integrated database retrieval system
