Sciurus carolinensis (gray squirrel): 124964325
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Entry
124964325 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM32
KO
K10607
tripartite motif-containing protein 32 [EC:
2.3.2.27
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124964325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124964325
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124964325
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124964325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Baculo_IE-1
zf-C3HC4_4
zf-RING_4
zf-B_box
zf-RING_11
FAM184
Zn_Tnp_IS1595
Motif
Other DBs
NCBI-GeneID:
124964325
NCBI-ProteinID:
XP_047380379
EnsemblRapid:
ENSSCRG00010013699
LinkDB
All DBs
Position
14:complement(17777710..17790392)
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AA seq
653 aa
AA seq
DB search
MASAAASHLNLDALREVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVR
CPFCSKITRITSLTQLTDNLTVLKIIDTAGLSEAVGLLMCRSCGRRLPRQFCRSCSLVLC
EPCREADHQPPSHCTLPVKEAAEERRRDFGEKLTRLRELMGELQRRKVALEGVSKDLQAR
YKAVLQEYGHEERRVQDELARSRKFFTGSLAEVEKCNSQVVEEQSYLLNIAEVQAVSRCD
YFLAKIKQADVALLEETADEEEPELTASLPRELTLQDVELLKVGHVGPLQIGQAVKKPRT
VNMEDSWAMEAAASAASTSVTFREMDMSPEEVVASPRASPAKQRGSEAATNIQQCLFLKK
MGAKGSTPGMFNLPVSLYVTSQGEVLVADRGNYRIQVFTRKGFLKEIRRSPSGIDSFVLS
FLGADLPNLTPLSVAMNCHGLIGVTDSYDNSLKVYTLDGHCVACHRSQLSKPWGITALPS
GQFVVTDVEGGKLWCFTVDRGAGVVKYSCLCSAVRPKFVTCDAEGTVYFTQGLGLNLENR
QNEHHLEGGFSIGSVGPDGQLGRQISHFFSENEDFRCIAGMCVDARGDLIVADSSRKEIL
HFPKGGGYSVLIREGLTCPVGIALTPKGQLLVLDCWDHCIKIYSYHLRRYSTP
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagcagcagcttctcacctgaacttggatgccctccgtgaagtgctggaatgc
cccatctgtatggaatccttcacagaagagcagctgcgacccaagctcttgcactgtggc
cacaccatctgccgccagtgcctggagaagctcctggctagtagcatcaatggggtccgc
tgtcccttttgcagcaagatcacccgcataaccagcctgactcagctcacagacaacctg
acagtgctgaagatcatcgacacagctgggctcagtgaggccgtggggctgctcatgtgc
cggtcctgtgggcggcggctgccccggcagttctgcaggagctgtagtttggtgttgtgt
gagccttgccgggaggcagaccaccaacctcccagccattgtacactccccgtcaaagag
gcagctgaggagcggcgtcgggactttggagaaaagttgactcgtctgcgggagctcatg
ggggagctgcagcggcggaaggtagctttggaaggtgtctccaaggaccttcaggccagg
tataaagcagtcctccaagagtacgggcatgaggagcgcagggtccaggatgagttggct
cgttctcggaagttcttcacaggctctttggctgaagttgagaagtgcaatagtcaagtg
gtagaggagcagagttacctgcttaacattgcagaggtgcaggctgtgtctcgctgtgac
tactttctggccaagatcaagcaggccgatgtagccctactggaggagacagctgatgag
gaggagccagagctcactgccagcttgccccgggagctcaccctgcaagatgtggagctc
cttaaggtaggtcatgtgggccccctccaaattgggcaagctgtaaagaagccccggaca
gttaacatggaagattcctgggccatggaggctgcagcctctgctgcctctacctctgtc
acatttagagagatggacatgagccctgaagaagtggttgcaagccccagggcctcacct
gctaaacagcggggttctgaggcagccactaatatccaacagtgcctctttctcaagaag
atgggggccaaaggcagcactccaggcatgttcaatcttccggtcagcctctacgtgacc
agtcaaggtgaggtgctcgttgctgatcgtggcaactaccgtatacaagtcttcactcgc
aaaggttttttgaaagagatacgccgcagccccagtggcattgatagctttgtgctaagc
ttccttggggctgatttgcccaatctcactcctctctctgtggccatgaactgccatggt
ctcattggtgtgactgacagctatgacaactccctcaaagtatataccttggatggccac
tgcgtggcctgtcacaggagccagctgagcaaaccatggggcatcacagccttgccatct
ggccagttcgtggtaacggatgtggaaggtggaaagctttggtgttttactgttgaccga
ggagcaggagtggtcaaatacagctgcctctgcagtgctgtgaggcccaagtttgtcacc
tgtgacgctgaaggcaccgtctacttcacccagggcttgggcctcaatctggaaaatagg
cagaatgagcaccacttggagggtggtttctccattggttcggtgggccctgatgggcag
ctgggtcgccagattagccacttcttctcggagaacgaggatttccgctgcatcgctggc
atgtgtgtggatgcccgtggtgacctcattgtggctgacagcagtcgcaaggaaattctc
cattttcctaagggtgggggctatagtgtccttattcgagaagggctcacttgtccagtg
ggcattgccctcactcctaagggacaattattggtcttggactgttgggatcattgcatc
aagatctacagctaccatctgagaagatattccaccccttag
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