KEGG   Sciurus carolinensis (gray squirrel): 124964504
Entry
124964504         CDS       T08117                                 
Name
(RefSeq) LOW QUALITY PROTEIN: TNF receptor-associated factor 1-like
  KO
K03172  TNF receptor-associated factor 1
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04064  NF-kappa B signaling pathway
ncar04210  Apoptosis
ncar04668  TNF signaling pathway
ncar05200  Pathways in cancer
ncar05202  Transcriptional misregulation in cancer
ncar05203  Viral carcinogenesis
ncar05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    124964504
   04668 TNF signaling pathway
    124964504
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124964504
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124964504
   05202 Transcriptional misregulation in cancer
    124964504
   05203 Viral carcinogenesis
    124964504
  09162 Cancer: specific types
   05222 Small cell lung cancer
    124964504
SSDB
Motif
Pfam: TRAF-mep_MATH TRAF_BIRC3_bd MIC19_MIC25
Other DBs
NCBI-GeneID: 124964504
NCBI-ProteinID: XP_047380857
EnsemblRapid: ENSSCRG00010013173
LinkDB
Position
14:13905785..13924915
AA seq 409 aa
MASSSASSPRPAPDENEFPFGCPRTVCQDPPEPRALRCTACLSENLRNSPDGICPKCRGD
NLQSESPGSLLTQEKVPPEMAEAGARCPFAGVGCSFRGSPQAVQEHEASSQACHLHLLLG
FTKHWKAPLGAGPGSGPAALEQHLSDLQLQAAVEVDCYRAPCSESREELALQHLMKEKLL
AELEEKLRVFENIVAVLNKEVEASHLALAASVHQSQLDREHILSLEQRVVELQQTLAQKD
QALGKLEQSLRLVEEASFDGTFLWKITNVARRCHESACGRTISLFSPAFYTAKYGYKLCL
RLYLNGDGSGKRTHLSLFIVIMRGEYDALLPWPFRNKVTFMLLDQNNREHAIDAFRPDLS
SASFQRPQSETNVASGCPLFFPLSRLHSPKHAYVKDDTMFLKCIVETSA
NT seq 1230 nt   +upstreamnt  +downstreamnt
atggcctccagctcagccagcagcccccgcccggccccggatgagaacgagtttcccttt
gggtgccctcgcactgtctgccaggacccaccagagcccagggccctccgctgcacagcc
tgtctctctgagaacctgaggaacagcccagatgggatctgtcccaaatgcagaggggat
aacctccaatctgaaagcccaggaagccttctgactcaggagaaggttccccctgagatg
gccgaggctggagcccggtgcccctttgccggcgttggctgctccttcagggggagcccg
caggccgtgcaggagcacgaggcctcgtcccaggcctgccacctgcacctgctgctgggc
ttcacgaagcactggaaggccccgctgggcgccggcccggggtctgggcccgcggccctg
gagcagcacctgtcagacctgcagctgcaggcggccgtggaggtggactgctaccgggcc
ccctgctccgagagccgggaggagctggccctgcagcacctcatgaaggagaagctgctg
gccgagctggaggagaagctgcgtgtgttcgagaacatcgtcgccgtcctcaacaaggag
gtggaggcctcccacctggccctggctgcctccgtccaccagagccagctggaccgcgag
cacatcctgagcctggaacagagggtggtggagttgcagcagaccctggcccagaaggac
caggcgctgggcaagctggaacagagcctgcgcctcgtggaggaggcctcctttgacggc
accttcctgtggaagatcaccaacgtcgccaggcgctgccatgaatctgcctgtggcagg
accatcagcctcttctccccagccttctacactgccaagtacggctacaagctgtgcctg
cggctctacctgaatggggacggctcggggaagaggacccacctgtcgctcttcatcgtg
atcatgaggggcgagtacgatgctctgctgccctggcccttccggaacaaggtcaccttc
atgctgctggaccagaacaaccgtgagcacgccattgacgccttccggcccgacctgagc
tcggcatctttccagcggccgcagagtgaaaccaacgtggccagcggctgcccgctcttc
ttccccctcagcaggctgcattcgcccaagcacgcctacgtgaaggacgacaccatgttc
ctcaagtgcatcgtggagaccagtgcttag

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