Sciurus carolinensis (gray squirrel): 124967864
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Entry
124967864 CDS
T08117
Name
(RefSeq) zinc finger protein 556-like isoform X1
KO
K09228
KRAB domain-containing zinc finger protein
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124967864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124967864
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124967864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
KRAB
zf-C2H2_6
Zn-ribbon_8
TBPIP_C
zf-C2H2_jaz
XPA_N
zf-C2H2_11
zf-AN1
Motif
Other DBs
NCBI-GeneID:
124967864
NCBI-ProteinID:
XP_047386199
EnsemblRapid:
ENSSCRG00010022025
LinkDB
All DBs
Position
17:complement(1537407..1548231)
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AA seq
629 aa
AA seq
DB search
MIAERARGDRCLKEGLGDMRAEVMLSSGTRALQRDLVKGASAAGSVSGTLSRRIRREGPL
WAPGPEGKLPPGRLRGTVIMGSGQSQGRGAAWDTMGAGRGRRTAPWALRSQAGPACGPDA
LRSLAPRVHPDPEIAAARSQRMDPVAFEDVVVDFSPEEWALLSVAQRKLYRDVMLETFRN
LASVDEGSQHETSGSISQQDICGEKLSNKQKIARFKRNDTWASLLGGNWGDHSIGNRHNK
QGRHLRIHVVKRLCARSKRNECGGSFCQIPNRSLSRKPAKAAKRYECSECRKIFTHSSSL
QRHRRIHTGQKLHKCDECGKAFSRPSYLRTHVKTHSGEKPYACKSCGKTFLRSYSLTEHI
RTHTGEKPFECKQCGKPFSCPKSFRVHVMMHTGGKPYECKQCGKAYSCPKSFRVHMIMHT
GEKPYECKQCGKSYCWLTSFQRHVRIHNGEKPYKCEKCGKAFGWPSSLHKHVRMHTKKKS
VNVNKMGNPSVDPCPSKDARMQTGKKLYKCEKCGKAFGWSSSLRKHLRKHTAEKAANVSN
VEKPPTSPHPPQNAVPFAEKPYKCEKCGKDFSCPKSFQGHMRSHLGKKPYKSAQYAVKHQ
LFILVITWLTGSWPGGDLSYICRPGRDEN
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctgagcgtgcccggggcgacaggtgtttgaaggaaggcctgggggacatgagg
gcagaggtcatgctgtcatcaggaaccagagctcttcagagggaccttgtgaaaggagcg
tctgcagcagggtccgtttctgggacactgagccgaaggatcagaagggaaggacccctg
tgggctcccgggccggagggcaagctgccgcctggacggctacgtggaactgtcatcatg
ggcagtggccagtcccaggggcggggtgctgcctgggacaccatgggggctgggcgcggc
cggaggaccgccccctgggcgctgaggtcgcaggccgggccagcctgtggcccagacgcc
ctgcgctcccttgcaccgcgggtccacccagacccggagatcgcggcagcccggagccag
aggatggacccagtggccttcgaggatgtggttgtggacttctccccggaggagtgggct
ctgctgagtgtggctcagaggaagctctacagagatgtgatgctggagaccttcaggaac
ctggcctcagtagatgaaggcagtcaacatgaaaccagcgggtccatttcccagcaagat
atttgtggagaaaaattatccaataaacagaaaatagcaaggttcaaaagaaatgatacc
tgggcttccctcttaggtggaaattggggagaccacagcattggaaatcgacacaacaaa
caggggagacatttgagaattcacgtggtgaagcgactttgtgcacggagtaaaaggaac
gagtgtggaggttccttctgccagattccaaatcgcagcctgtccaggaaaccagccaag
gcagctaaacgctacgagtgcagtgagtgccgaaagatcttcacccattcctcatcgctt
cagaggcacagaagaatccatacgggacagaagctgcataagtgtgacgaatgtgggaaa
gccttcagccgcccttcctatctcaggactcacgtgaagacgcacagtggagagaaaccc
tacgcgtgcaaatcttgtgggaaaacatttctccgttcctattctctcactgaacacatc
aggactcacacgggagagaaaccctttgagtgtaagcagtgtgggaaacccttcagctgt
cccaagtccttccgtgtacacgtgatgatgcacactggagggaagccctatgagtgtaag
cagtgtgggaaggcctacagctgtcccaagtccttccgagtacacatgataatgcacact
ggagagaagccctatgagtgtaagcagtgcgggaaatcctactgttggctcacatccttc
caaagacacgtgagaattcacaatggagaaaagccctataagtgtgaaaaatgtgggaaa
gcctttggttggccttcatccttacacaaacatgtgagaatgcacactaaaaagaaatct
gtaaatgttaacaagatgggaaacccttcagttgacccttgtccttccaaagatgcaaga
atgcagactggaaagaaactctacaagtgtgaaaaatgtgggaaagcctttggctggtcc
tcttccttacgtaagcacctgagaaagcacactgccgagaaagctgccaatgtaagtaat
gtggagaagccgcccaccagcccccatcctccccaaaatgcagtgccgtttgcagagaag
ccctataagtgtgaaaaatgtgggaaagatttcagttgtcccaaatcctttcaaggtcat
atgagaagtcaccttggaaagaaaccctataaatcagcacagtacgccgtgaagcatcag
ttatttatcctcgtgatcacatggctgacggggagctggccaggaggagacttgtcctac
atatgtagaccaggaagagatgaaaactga
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