Sciurus carolinensis (gray squirrel): 124968255
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Entry
124968255 CDS
T08117
Name
(RefSeq) sodium channel protein type 10 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124968255
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124968255
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
CcmD_alt
Motif
Other DBs
NCBI-GeneID:
124968255
NCBI-ProteinID:
XP_047386494
EnsemblRapid:
ENSSCRG00010022113
LinkDB
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Position
17:30662144..30754223
Genome browser
AA seq
1972 aa
AA seq
DB search
MEFPLGSLETTNFRRFTPESLVEIEKQIAAHQAGKKVREKHREKKDQEEKPRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWIFSPFNLIR
RTAIKMSVHSWFTLFITVTILVNCVCMTQTDLPEKIEYIFTVIYTFEALIKILARGFCLN
EFTYLRDPWNWLDFSVITLAYVGAAIDLRGISGLRTFRVLRALKTVSVIPGLKVIVGALI
HSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNDTAPDEASNYSSHRTSEWNVP
HGDQDLSYVIKSGTSDPLLCGNGSDAGHCPVGSICLKTSENPDFNYTSFDSFAWAFLSLF
RLMTQDSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIAE
IEAKEKKFQEALEMLRKEQEVLTALGIDTASLHSHDGSPLPSKNASERRHRIKPKVSEGS
TDDNRSPQSEPYNQRRMSFLGLTSGRRRASHGSMFHFRAPGRDVSFPDGITDDGVFQGDH
ESRRGSLLLNKVVGQQGPLPQPPSLGSGHGEEGYSMLPTSELVPGATEVPVFDAGQKKTF
LSAEYLNEPFRVQRAMSVVSIMTSVIEELEDSQQRCPPCLTSLAQKYLIWECCPTWVKLK
TALFGLVTDPFAELTITLCIVVNTVFMAMEHHGMSTAFETMLHVGNIIFTIFFTAEMVFK
IIAFDPYYYFQKRWNIFDCVIVTVSLLELSVAKKGSLSVLRTFRLLRVFKLAKSWPTLNT
LIKIIGNSVGALGNLTIILAIIVFIFALVGKQLLGDDYREHRNVIAVPGEEWPRWHMHDF
FHSFLIVFRILCGEWIENMWACMEVSQKSICLILFLTVMVLGNLVVLNLFIALLLNSFSA
DNLTAPEDDGEVNNLQVALARIQVFSRRTKQALRSFFSRPCLLPWPKAEPQLWMKPSISI
SKAENHIAANAAAVRSPGGLPALGDPREEHGDFITNPNVWVSVPIAEGESDLDDLEDDGE
QDAQSSCQEVPPKVQEQLQQTGRCEDHLAPTSPGSGTSSEDLTPYLGEQQKDTAVPQVPA
EEVDDTSSSEGSTVDCPDPEEMLRKIPELADNLEEPEDCFTEGCIQHCPCCKVNATKFPW
AVGWQLRKTCFRIVEHSWFESFIIFMILLSSGSLAFEDYYLDQKPKVKALLEYTDRVFTF
IFVFEMLLKWVAYGFKKYFTNAWCWLDFLIVNISLTSLVAKILEYSDMASIKALRTLRAL
RPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFGRCINNTN
EDFSLVHWSIVDNISDCKNQNYTGNLFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYA
AVDSREVNSQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPLNRYQGFIFDVVTRQAFDIAIMVLICLNMITMMV
ETDEQSDEKTKILGKINQFFVAVFAGECVLKMFALRHYYFTNGWNVFDFIVVILSIGSLV
FSAILTSLENYFSPTLLRVIRLARIGRILRLIRAAKGIRTLLFALMMSLPALFNIGLLLF
LVMFIYSIFGMASFAYVKWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGP
PYCDPNLPNGNGTRGDCGSPAVGIIFFTTYIIISFLIVVNMYIAVILENFNVATEESTEP
LSEDDFDMFYETWEKFDPEATQFINFSALSDFADTLSGPLRIPKPNQNILIQMDMPLVPG
DKIHCLDILFAFTKNVLGESGELDSLKANMEEKFMATNLSKASYEPIATTLRWKQEDISA
TVIQKAYRSYVLYRSLTLSNPSRVPRTEEEAVSHVDEGFVAFMTSENCVLPDKSETASAT
SFPPSYDSVTRGLSDRVNMSTSSSMQNENEATSKEVTAPDPSENTPAGHVQL
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atggaattccccttggggtccctggaaactaccaacttccgtcggttcactccagagtcg
ctggtggagattgagaagcaaattgctgcccatcaggcaggaaagaaagtcagagaaaag
catagagagaagaaggaccaagaagagaagccacggccccagctggacttgaaagcctgc
aaccagctgcccaagttctatggtgagctcccagcagaactggtcggggagcccctggag
gatctagaccccttctacagcacacaccggacatttatggtgctgaacaaaggcaggacc
atttcccggtttagtgccactcgggccctgtggatattcagtcccttcaacctgatcaga
agaacggccatcaaaatgtctgtccattcgtggttcactttatttatcacggtcaccata
ttggtcaattgtgtgtgcatgacccaaaccgatcttccagagaaaatcgagtacatattc
actgtcatttacacctttgaagctttgatcaagatactggcaagaggattttgtctaaat
gagttcacgtacctgagagatccttggaactggctggactttagcgtcattaccctggca
tatgttggtgcagcaatagatctccgaggaatctctggcctgaggacattccgcgttctt
agagctttaaaaacagtttctgtgatcccagggctgaaggtcattgtgggggccctgatc
cactccgtgaggaagctggctgatgtgaccatccttactgtcttctgcctgagtgtcttt
gccctggtgggtctgcagctcttcaagggcaacctcaagaacaagtgtgtcaagaatgac
acagctcctgatgaggcctctaactattcatctcacagaacaagtgagtggaatgtccct
catggagatcaagatttatcatatgttattaaatcaggcacttctgatcccttactgtgt
ggcaatggatctgatgcaggccactgccctgttggttctatctgccttaaaacttctgaa
aacccagattttaactacaccagctttgattcctttgcttgggctttcctctcactgttc
cgcctcatgacacaggattcctgggaacggctctaccagcagaccctcagagcttctggg
aaaatgtatatggtcttttttgtgctggtcatcttcctgggatctttctacctagtcaac
ttgatcttggctgtggtcaccatggcatatgaagaacagaaccaggcgacaattgctgaa
attgaagcaaaggagaagaagtttcaggaggctcttgagatgctccggaaggagcaggag
gtgctgacagcactgggcattgacacagcctctctccattcccacgacggatcaccttta
ccttccaaaaatgccagtgagagaaggcacagaataaaaccaaaagtgtcggagggctcc
acggatgacaacagatcaccccaatctgagccttacaaccagcgcaggatgtctttccta
ggccttacttctggaagacgtcgggctagccatggcagtatgtttcatttccgagcccct
ggccgagacgtctcattccctgatgggatcacagatgatggagtctttcaaggagaccat
gagagccgtcggggctccctgctgctgaacaaggttgttggacagcaaggcccactgcct
caaccccccagccttggctctgggcatggagaagagggatactcaatgctgcccactagt
gagcttgtccctggagccaccgaagtcccggtgtttgatgcagggcagaagaagactttc
ttgtcagcagaatacttgaatgaacctttcagagtccaaagagcaatgagtgttgtcagt
atcatgacctccgtcatcgaggaactggaggactctcaacagcgatgcccaccctgcttg
accagtttggctcagaagtatctgatctgggagtgctgcccgacctgggtgaagctcaag
acagctctctttgggctggtgacggacccctttgcagaactcaccatcaccctgtgcatc
gtggtgaacaccgtcttcatggccatggagcaccacggcatgagcactgccttcgaaacc
atgctccacgtaggcaacatcatctttaccatattttttactgctgaaatggtcttcaaa
atcattgccttcgacccctactactacttccagaagaggtggaatatcttcgattgtgtc
attgtcaccgtgagcctgctggagctgagcgtggccaagaagggaagcttgtctgtgctg
cggactttccgcttgctgcgggtcttcaagctggccaagtcctggccaaccttaaacaca
ctcatcaagatcatcgggaactccgtgggggcgctggggaacctgaccatcatcctcgcc
atcattgtcttcatcttcgctctggtgggcaagcagcttctgggagacgactaccgggag
caccggaacgttatcgctgtgccaggtgaagagtggcctcgctggcacatgcacgacttc
ttccattccttcctcatcgtcttccggatcctttgtggagagtggatcgagaacatgtgg
gcctgcatggaagtcagccagaaatccatatgcctcatcctcttcttgacggtcatggtg
ctggggaaccttgtggtgctcaacctgttcatcgccctgctgctgaactctttcagtgcc
gacaacctcactgctccagaggatgatggggaagtgaacaacctacaggtggccctggca
cgaatccaggtgttcagccgacgcaccaagcaggcgcttcgcagcttcttcagcaggccc
tgcctgctcccctggcccaaggcggagccccagctgtggatgaaaccctccatctccatc
tccaaagccgagaaccacattgctgccaatgcggctgctgtgaggagccctggagggctg
ccggctctcggagaccccagggaggaacatggcgacttcatcaccaatcctaacgtgtgg
gtctctgtgcccattgctgagggtgaatctgatctcgatgacttggaggatgatggtgag
caggatgctcaaagctcctgtcaggaagtgccccccaaagtacaggagcagctgcagcaa
actgggaggtgtgaggaccacctggcacctacaagtccaggctctggtacatcctctgag
gacctaactccatacctgggtgagcagcagaaagacacagctgttcctcaggttcctgca
gaggaagtggacgacacaagttcctcagagggcagcacggtggactgcccagacccggag
gagatgctgaggaagatccctgagctggcggacaacctggaagaacccgaggactgcttc
acagaaggctgcattcaacactgtccctgctgcaaagtgaatgccaccaagtttccatgg
gccgtgggctggcagctgcgcaagacctgcttccgaatcgtggagcacagctggtttgag
agcttcatcatcttcatgatcctccttagcagtgggtctctggcctttgaagattattac
ctggaccagaagcccaaggtcaaagctctgctggaatacactgacagggtgttcaccttt
atctttgtgtttgagatgctgctcaagtgggtggcctacggcttcaagaagtacttcacc
aacgcctggtgctggctggacttcctcattgtgaatatctcactgacaagtcttgtagcg
aagatcctggaatattctgatatggcatccatcaaagcccttcggaccctccgtgccctg
cggccactgcgtgctctgtctcgattcgaaggcatgcgggtggtggtggatgccttggtg
ggcgccatcccatccatcatgaatgtcctcctggtctgcctcatcttctggctcatcttc
agcatcatgggagtgaacctcttcgcaggaaagtttgggaggtgcatcaacaataccaat
gaagacttttctcttgtgcattggtcaattgtggataacatttctgactgtaagaaccaa
aactacacaggcaacctcttctgggtcaacgtgaaagtcaactttgataatgttgcaatg
ggttacctcgcacttcttcaggtggcaacgtttaaaggctggatggacatcatgtatgca
gctgttgattcccgagaggtcaatagtcagcccaagtgggaggacaatgtgtacatgtac
ttgtacttcgtcatcttcatcattttcggtggcttcttcacactgaatctctttgttggg
gtcataattgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatg
acagaggaacagaagaagtactacaatgccatgaagaagctgggctctaagaaaccccag
aaacccatcccacggcctctgaacaggtaccagggattcatctttgacgttgtgaccagg
caagcttttgacattgccattatggtcctcatttgcctcaacatgatcaccatgatggtg
gagacggatgagcagagtgatgaaaagacgaaaatcctcggcaaaatcaatcagttcttc
gtggctgtcttcgccggcgagtgtgtcttgaagatgttcgccttaaggcattactacttc
accaatggctggaatgtgtttgacttcattgtagtgatcctctccattgggagtctggtg
ttttctgcaattcttacatctctagaaaattacttctctccaacgctgttacgagtcatc
cgcctggcccgaatcggccgcatcctcaggctgatccgagcagccaaggggatccgcaca
ctgctctttgccctcatgatgtccctgcctgccctcttcaacattgggctgctgctcttc
ctcgtcatgttcatctactccatcttcggcatggccagcttcgcttatgtcaagtgggag
gccgggatcgatgacatgttcaacttccagaccttcgccaacagcatgctgtgcctattc
cagatcacaacgtctgctggctgggatggcctcctcagccccatcctcaacacagggccc
ccctactgcgaccccaatctgcccaatggcaatggcactagaggagactgtgggagcccg
gccgtgggcatcatcttcttcaccacctacatcatcatctccttcctcattgtggtcaac
atgtacattgcagtgattctggagaacttcaatgtagctacggaggagagcaccgagccc
ctgagcgaggacgactttgacatgttctatgagacctgggagaaattcgacccagaggcc
acccagttcattaacttttctgccctctcagactttgcagacactctctcaggccccctg
agaatcccaaaacccaatcagaatatattaatccagatggatatgcccttggtccctgga
gataagatccactgcttggacatcctctttgccttcaccaagaatgttctgggagaatca
ggagagttggattccctgaaggcaaacatggaggagaagtttatggcaactaatctttca
aaagcatcctatgaaccaatagcaaccaccctccggtggaagcaagaagacatttcagcc
actgtcattcaaaaggcctatcggagttatgtgctatatcgctccctgacactctccaac
ccttccagagtgcccaggactgaggaggaggctgtgtcacacgtagatgaaggctttgtg
gcatttatgacaagtgagaattgtgtccttccagacaaatctgaaactgcatctgccaca
tctttccctccatcctatgacagcgtcactagaggcctcagtgatagagtcaatatgagc
acatccagctcaatgcaaaatgaaaatgaagccaccagtaaggaggtgactgcaccagat
cctagtgagaatactccagctggacatgtccagctctga
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integrated database retrieval system
