Sciurus carolinensis (gray squirrel): 124968534
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Entry
124968534 CDS
T08117
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase BAP1 isoform X1
KO
K08588
ubiquitin carboxyl-terminal hydrolase BAP1 [EC:
3.4.19.12
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
124968534
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124968534
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124968534
03036 Chromosome and associated proteins [BR:
ncar03036
]
124968534
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
124968534
Peptidases and inhibitors [BR:
ncar01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
124968534
Ubiquitin system [BR:
ncar04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
124968534
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
124968534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
Motif
Other DBs
NCBI-GeneID:
124968534
NCBI-ProteinID:
XP_047387038
EnsemblRapid:
ENSSCRG00010023912
LinkDB
All DBs
Position
17:56527426..56536215
Genome browser
AA seq
729 aa
AA seq
DB search
MNKGWLELESDPGLFTLLVEDFGVKGVQVEEIYDLQSKCQGPVYGFIFLFKWIEERRSRR
KVSTLVDDTSVIDDDIVNNMFFAHQLIPNSCATHALLSVLLNCSNVDLGPTLSRMKDFTK
GFSPESKGYAIGNAPELAKAHNSHARPEPRHLPEKQNGLSAVRTMEAFHFVSYVPITGRL
FELDGLKVYPIDHGPWGEDEEWTDKARRVIMERIGLATAGEPYHDIRFNLMAVVPDRRIK
YEARLHVLKVNRQTVLEALQQLIRVTQPELIQTHKSQESQLPEESKPASSKSPLVLETGR
APAVSEGIHTDGAEEVAGSCPQAPTHSPPSKPKLVVKPPGSSLNGVPPNPTPIVQRLPAF
LDNHNYAKSPMQEEEDLAAGVGRSRVPVRPPQQYSDDEDDYEDDEEEDVQNTNSALRYKR
KGTGKPGSLSSSADGQLSVLQPNTINVLAEKLKESQKDLSIPLSIKTSTGAGSPAVAVPT
HSQPSPTPSNESTDTASEIGSAFNSPLRSPIRSANPTRPSSPVTSHISKVLFGEDDSLLR
VDCIRYNRAVRDLGPVISTGLLHLAEDGVLSPLALTESGKGSSPSVRPSQGNQGSSSPEE
KEVVEATDNREKTGLVRPGEPLSGEKYSPKELLALLKCVEAEIANYEACLKEEVEKRKKF
KIDDQRRTHNYDEFICTFISMLAQEGMLANLVEQNISVRRRQGVSIGRLHKQRKPDRRKR
SRPYKAKRQ
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgaataagggctggctggagctggagagcgacccgggccttttcaccctcctggtggaa
gatttcggtgtcaaaggggtgcaggtggaggagatatatgaccttcagagcaaatgtcag
ggccctgtgtatggattcatctttctgttcaaatggatcgaagagcgcagatcccgtcgc
aaggtctctaccttggtggatgatacgtctgtgattgatgacgatattgtgaataacatg
ttctttgctcatcagctgatccccaactcttgtgctactcatgccttgcttagtgtgctc
ctcaattgcagcaatgtggacctggggcccaccctgagtcgcatgaaggatttcaccaaa
ggcttcagccctgagagcaaaggatacgcaattggcaatgccccagagttggccaaggca
cataatagccatgccaggcctgaaccacgtcacctccctgagaagcagaatggccttagt
gcagtgcgtaccatggaggcattccactttgtcagttatgtgcctatcacaggccggctc
tttgaactggatgggctgaaggtctaccccattgaccatgggccctggggagaggatgag
gagtggacagacaaggcccggcgggtcatcatggagcgtattggcctcgccactgcaggg
gagccctaccacgacatccgcttcaacctgatggcagtggtgcccgaccgcaggatcaaa
tatgaggccaggctgcatgtgctgaaggtgaaccgtcagacagtactggaggccctgcag
cagctcattagagtaacacagccagagttgattcagacccacaagtctcaagagtcacaa
cttcctgaggagtccaagccagccagcagcaagtcccccctcgtgctggagacaggcagg
gccccagccgtctctgagggcatccacacagatggtgcagaggaggtggctggttcatgc
ccacaagctccgacccacagtcctcccagcaaacccaagctagtggtaaagcctccagga
agcagcctcaatggggttcctcccaatcccacccccatcgtccagcgactgccagccttt
ctagacaatcacaactatgccaagtcccccatgcaggaggaggaggacctggcagcaggt
gtgggccgcagtcgagtgccagttcgtccaccccagcagtactcagatgacgaggatgac
tatgaggatgatgaggaggaggatgtgcagaataccaactctgccctcagatacaagcgg
aaagggacagggaagccagggtcattgagcagttctgcagatgggcagctatcagtgctg
cagcccaacaccatcaacgtcttagctgagaaactcaaagagtcccagaaagacctctca
attcctctgtccatcaagactagcaccggggctgggagtccagctgtggcagtgcccaca
cactcgcagccctcgcctacccccagcaacgagagcacggacacagcctctgagatcggt
agtgctttcaactcacctctgcgctcacccattcgctctgccaacccgacacggccctcc
agccctgtcacttcccacatctccaaggtgctttttggggaggatgacagcctgctgcgt
gttgactgcatacgctacaaccgtgctgtccgtgacctgggtcctgtcatcagcacaggc
ctgctgcatcttgctgaggatggtgtgctgagtcccctggcactgacagagagtgggaag
ggttcctcaccttctgtcagaccgagccaaggcaaccaggggtccagcagcccagaggag
aaggaggtagtggaagccacggacaacagagagaagactgggctggtcagacctggcgag
cccttaagtggggagaagtactcacccaaggagctgctggcactgctcaagtgtgtggag
gctgagatcgcaaactacgaggcttgtctcaaggaggaggtagagaagagaaagaagttc
aagattgatgaccagagaaggacccacaactatgacgagttcatctgtaccttcatctcc
atgctggctcaggaaggcatgctggccaatctggtggagcagaatatctcagtgcggcgg
cgccaaggggtcagcattggccgacttcacaagcagcggaagcctgaccggcggaaacgt
tctcgcccctataaagccaagcgccagtga
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integrated database retrieval system
