KEGG   Sciurus carolinensis (gray squirrel): 124969471
Entry
124969471         CDS       T08117                                 
Name
(RefSeq) bromodomain-containing protein 4 isoform X1
  KO
K11722  bromodomain-containing protein 4
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:ncar01001]
    124969471
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ncar03021]
    124969471
   03036 Chromosome and associated proteins [BR:ncar03036]
    124969471
Protein kinases [BR:ncar01001]
 Serine/threonine kinases: Other
  BRD family [OT]
   124969471
Transcription machinery [BR:ncar03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Brd4/P-TEFb complex
     124969471
Chromosome and associated proteins [BR:ncar03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    124969471
SSDB
Motif
Pfam: Bromodomain BET BRD4_CDT
Other DBs
NCBI-GeneID: 124969471
NCBI-ProteinID: XP_047388386
EnsemblRapid: ENSSCRG00010017853
LinkDB
Position
17:complement(19305697..19390791)
AA seq 1410 aa
MRAGLRQRKQDSPSWSPQLHSFCGVPGEECDGITSMSAESGPGTRLRNLPVMGDGLETSQ
MSTTQAQAQPQPANAASTNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQ
PVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDD
IVLMAEALEKLFLQKINELPTEETEIMIVQAKGRGRGRKEAGTAKPGVSTVPNTTQASTP
PQTQTPQQNPPPVQATPHPFPAVTPDPIGQTPVMTVVPPQPLQTPPPVPPQPPPPPAPAP
QPVQSHPPIIAATPQPVKTKKGVKRKADTTTPTTIDPIHEPPSLAPEPKTTKLGPRRESS
RPVKPPKKDVPDSQQHPLPEKSSKVSEQLKCCSGILKEMFAKKHAAYAWPFYKPVDVEAL
GLHDYCDIIKHPMDMSTIKSKLESREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARK
LQDVFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSSSDSDSSTDDSEE
ERAQRLAELQEQLKAVHEQLAALSQPQQNKPKKKEKDKKEKKKEKHKKKEEVEENKKSKA
KELPPKKTKKNNSSSNSASKKEPAPMKSKPPPTYESEEEDKCKPMSYEEKRQLSLDINKL
PGEKLGRVVHIIQSREPSLKNSNPDEIEIDFETLKPSTLRELERYVTSCLRKKRKPQAEK
VDVIAGSSKMKGFSSSESESTSESSSSDSEDSETEMAPKSKKKGHPGRDQKKHHHHHHQQ
MQPAPAPVPQQPPPPPQQPPPPPQQQQQQQQQQQQQQQPPPPPPPPPPSMPQQAAPVMKS
SPPPFIAAQVPVLEPQLPGSVFDPIGHFTQPILHLPQPELPPHLPQPPEHSTPPHLNQHA
VVSPPALHNALPQQPSRPSNRAAALPPKPTRPPAVSPALTQPPLLPQPPMAQPPQVLLED
EEPPAPPLTSMQMQLYLQQLQKVQPPTPLLPSVKVQSQPPPPLPPPPHPSVQQQLQQQPP
PPPPPQPQPPPQQQHQPPPRPVHLQPMQFSAHIQQPPPPPGQQPPHPPPGQQPPPPQPAK
PQQVIQHHPSPRHHKSDPYSTGHLREAPSPLMIHSPQMPPFQSLTHQSPPQQNVQPKKQD
LHKASVVQPQPLVVVKEEKIHSPIIRSEPFSPSLRPEPPKHPESIKAPVHLPQRPELKPV
DVGRPVIRPPEQNAAPPGAPDKDKQKQEPKTPVAPKKDLKIKNMGSWASLVQKHPTTPSS
TAKSSSDSFEQFRRAAREKEEREKALKAQAEHAEKEKERLRQERMRSREDEDALEQARRA
HEEARRRQEQQQQQQQQRQEQQQQQQQQAAAVAAAAAPQAQSSQPQSMLDQQRELARKRE
QERRRREAMAATIDMNFQSDLLSIFEENLF
NT seq 4233 nt   +upstreamnt  +downstreamnt
atgagggctggcctcagacagaggaaacaagactctcctagttggagcccacaactgcat
tccttttgtggagtgcctggtgaagaatgtgatgggatcactagcatgtctgcggagagt
ggccctgggacaagattgagaaatctgccagtaatgggggatggactagaaacctcccaa
atgtctacaacacaggcccaggcccaaccccaaccagccaacgcagccagcaccaacccc
ccacccccggagacctccaatcccaacaagcccaagaggcagaccaaccaactgcaatat
ctgctcagagtggtgctcaagacactatggaaacaccagtttgcatggcctttccaacag
cctgtggatgcggtcaagctaaacctccctgattactataagatcattaaaacacctatg
gatatgggaacaataaagaaacgcttggaaaacaactattactggaatgctcaggaatgt
atccaggacttcaacactatgtttacaaattgttacatctacaacaagcctggagatgac
atcgtcttaatggcagaagctctggagaagctcttcttgcaaaaaatcaatgaactgccc
acagaagaaactgagatcatgatagtccaggcaaaaggaagaggacgtgggaggaaagaa
gcagggacagcaaaacccggcgtctccacggtaccaaacacaactcaagcatcaactcct
ccgcagacccagacccctcagcagaaccctccacctgtgcaggccacacctcaccccttc
cctgctgtcaccccagaccccatcggtcagacccctgttatgacagtggtgcctccccag
ccactgcagacacccccaccagtgccacctcagccaccacccccacctgctccagcccca
cagcccgtgcagagccatccacccatcatcgcggccaccccacagcctgtgaagacaaag
aagggggtgaagaggaaagcagataccaccactcccaccaccattgaccccattcatgag
ccaccctcactggcccctgagcccaagaccaccaagctgggcccccggcgggagagcagc
cggcctgtgaagcccccaaagaaggatgtgccagactcacagcagcacccattgccagaa
aagagtagcaaggtctcagagcagctcaagtgctgcagtggcatcctcaaggagatgttc
gccaagaagcatgctgcctacgcctggcctttctacaagcctgtggatgtggaggcactg
ggcctgcacgactactgtgacatcatcaagcaccccatggacatgagtacaatcaagtct
aaactagagtcccgtgagtaccgagatgctcaggaatttggtgccgatgtccgattgatg
ttttccaactgctacaagtacaaccctcctgaccatgaggtagtagccatggcccgaaag
ctccaggatgtttttgaaatgcgctttgccaagatgccagacgagcctgaggagccagtg
gtggctgtgtcctccccagcagtgccaccccccaccaaggtggtggccccaccctcatcc
agtgacagcagcagtgatagctcctcggacagtgacagttccactgatgactctgaggaa
gagcgagcccagcggctggctgagctccaagagcagctcaaagccgtgcacgaacaactt
gcagccctctcgcagccccagcagaacaaaccaaagaaaaaggaaaaagacaagaaggaa
aagaaaaaggaaaagcacaaaaagaaagaggaagtagaggagaacaagaaaagcaaagcc
aaggaacttcctcccaaaaagacaaagaaaaacaacagcagcagcaacagtgcaagcaag
aaggagccagcacccatgaagagcaagccccctcccacatatgagtctgaagaagaggac
aaatgcaagcccatgtcatatgaggagaagcgacagctcagcctggacatcaacaagctc
ccgggtgagaagctgggccgcgtggtgcacatcattcagtcacgggagccttcactcaag
aactccaaccctgatgagattgagattgactttgagactctgaagccgtccacattgcgc
gagttggagcgctacgtcacctcctgtttgcggaagaaaaggaaacctcaagctgagaaa
gtcgatgtgattgctggctcctccaagatgaagggcttctcgtcctctgagtcagagagc
accagcgagtccagctcctctgacagtgaagactccgaaacagagatggctccgaagtca
aaaaagaaggggcaccccgggagggaccagaagaagcaccatcaccaccaccatcagcag
atgcagccagccccggcccctgtgccccagcaaccaccccctcctccccagcagccccca
ccgcctccgcagcagcagcagcagcagcagcagcagcagcagcagcaacaacaaccacca
cccccacccccgccgcccccaccctccatgccacagcaggcagccccagtgatgaagtcc
tcacccccgcccttcatcgcggcccaggtacctgttctggagccacagctcccaggcagc
gtcttcgaccccatcggccacttcacacagcccatcctgcacctaccgcagcctgagctg
ccccctcacctgccccaaccacctgagcacagcactccgccccatctcaaccagcacgcc
gtggtctctcctccagctttgcacaacgcactgccccagcagccatcacggcctagcaac
cgagctgccgccctcccccctaagcccacccggccccctgccgtgtcacctgccctgacc
cagccaccactgctcccacagccccctatggcccagccccctcaagtgttgctggaggac
gaagagccacctgccccacccctcacctccatgcagatgcagctgtatctgcagcaactg
cagaaggtgcagccccccacgccgctactcccttccgtgaaggtgcagtcccaaccccct
ccacccctgccacctcctccccatccttctgtgcagcagcaactccaacagcagccacca
ccacccccaccaccccagccccagccgccaccccagcagcagcaccagcccccaccacga
ccagtgcacttgcagcccatgcagttctccgcccacatccagcaacctccaccacccccg
ggccagcagcccccccacccacccccgggccagcagccacccccaccccagcccgccaaa
cctcaacaagtcatccagcatcacccttcaccccggcaccacaagtcggacccctactca
actggtcacctccgtgaagccccctccccgcttatgatacattccccccagatgccaccg
ttccagagcctgacccaccagtctccaccccagcaaaatgtccagcctaagaagcaggat
ttgcataaggcctcagtggtccagccccagcccctggtggtggtgaaagaggagaaaatc
cactcacccatcatccgcagtgagcccttcagtccctcactgcggccggagccccccaag
cacccggagagcatcaaggccccagtccacctgccccagcgacctgagttgaaacctgtg
gatgttgggagacctgtgatccgaccccctgaacagaatgcagcccctccaggggcccct
gacaaggacaaacagaaacaggagcctaagacgccagtggcaccaaaaaaggacctgaaa
atcaagaacatgggctcctgggccagcctggtacagaagcatccaaccaccccatcctct
acagctaagtcatcaagtgacagttttgaacagtttcgccgtgctgctcgagagaaggaa
gagcgggagaaggccctgaaggcacaagctgagcatgcagagaaggagaaagagcgactg
cggcaggagcgcatgaggagccgagaggatgaagatgcactggagcaggcacggcgagcc
catgaggaggcacggcggcgccaggagcagcagcagcagcagcagcagcaacggcaggaa
cagcagcagcagcagcagcagcaggctgccgctgtggctgccgctgccgccccccaggcc
caaagctcccagccccagtccatgctggaccagcagagggaattggcccggaagcgggag
caggagcgaaggcgccgggaggccatggcagctacgattgacatgaatttccagagtgat
ctattgtcaatatttgaagaaaatcttttctga

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