Sciurus carolinensis (gray squirrel): 124970208
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Entry
124970208 CDS
T08117
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124970208
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124970208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
124970208
NCBI-ProteinID:
XP_047389340
EnsemblRapid:
ENSSCRG00010023724
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All DBs
Position
18:complement(35633338..36964589)
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AA seq
508 aa
AA seq
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MKSWQLIAVVGDALQRSRCPTLAQRRWRRCASGLLIRTGTCGGWNPGNAKRRWRDAAAFA
ASEWDTDIKADCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQPYASAQFAPPQNG
IPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQSHSEQSAADTSAQTVSGTATQTDDAA
PTDGQPQTQPSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSK
GFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVG
AVYSPEFYAGTVLLCQTNQEGSSVYSGPSSLVYTPAMPGFPYPAATAAAAYRGAHLRGRG
RTVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTPATAAAYSDRNQF
VFVAADEISCNTSAVTDEFMLPTPTTTHLLQPPPTALVPCPKVPAPAQTSEELSCTLPGL
CCQAAENLTASPPLLQFMFKVIVAQERK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttggcagctaattgcagtcgtgggagatgcccttcagaggagccgctgtcca
acgctagcgcagagaaggtggcggcgttgcgcctccgggctgctgattagaacagggact
tgcggcggatggaatccgggaaacgcgaagcggcgatggagggatgcagctgcgtttgca
gccagtgaatgggacacggacatcaaagcagactgcgtggaaatagaggacagaaaggtt
tcaaggcaacagatgaattgtgaacgagagcagctccggggtaatcaggaagcagcggct
gcccctgacacgatggcccagccttacgcttcggcccagtttgctccgccccagaacggc
atccccgcggaatacacggccccccatccccaccccgcgccagagtacacgggccagacc
accgtccctgagcacacgttaaacctgtaccctcccgcccagtcgcactcggagcagagc
gccgcggacaccagcgcgcagaccgtgtccggcaccgccacacagacagatgatgcagca
ccgacggacggccagccccagacacagccttctgaaaacacagaaaacaagtcccagccc
aagcgcctgcatgtctccaatatccccttccggttccgggatccggacctccggcaaatg
tttggtcaatttggtaaaatcttagatgttgaaataatttttaatgagcgcggctcaaag
ggatttggtttcgtaactttcgaaaatagtgccgatgcggacagggcgagggagaaatta
cacggcaccgtggtagagggccgtaaaatcgaggtaaataatgccacggctcgcgtaatg
acaaataaaaagaccgtgaacccctatacaaatggctggaaattgaatccagttgtgggt
gccgtctacagtcctgagttctatgcaggcacggtgctgttgtgccagaccaaccaggag
ggatcttccgtgtacagtggccccagttcacttgtatatactcccgcaatgcccggcttc
ccgtatccagctgccaccgcggcggccgcctatcgaggggcgcacctgcgaggccgcggc
cgcacagtgtacaacaccttccgggccgcggcgcccccacccccgatccctgcctacggc
ggagtagtgtatcaagagcctgtgtatggcaataaattactgcagggtggttacgctgca
taccgctacgcccagcccacccctgccactgccgctgcctacagtgacagaaatcagttc
gtcttcgttgcagcagatgaaatttcttgtaacacctctgcagttacggacgagtttatg
ctgccgacccctaccaccacacacttgctccagcccccacctacggcgttggtgccatgc
cccaaggttccagccccagcacagacttcagaggagctaagctgcacacttccaggcctc
tgctgtcaggcagctgagaatctgactgcctctcctccccttttacaattcatgtttaaa
gtcatagtcgcccaggaaagaaaatag
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