Sciurus carolinensis (gray squirrel): 124970283
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Entry
124970283 CDS
T08117
Name
(RefSeq) nuclear envelope pore membrane protein POM 121C-like isoform X1
KO
K14316
nuclear pore complex protein Nup121
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124970283
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124970283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124970283
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124970283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
124970283
NCBI-ProteinID:
XP_047389480
LinkDB
All DBs
Position
18:complement(5691497..5713187)
Genome browser
AA seq
1214 aa
AA seq
DB search
MSPAAAAAGGGERRRPPIASARDGRGRARGCGGPAGAALLGLVLLGLVLYLVPAAAALAW
LAVGATAAWWGLSREPRGPRALPSFARSARRQRTLLASPPAKSAVNGSLLEPRTLLEGPD
PAELLLMGSYLGKPGPPQAATAPEGRDPRERPGRRPPVRSPPPAAQRVAHVYPSPPTPLL
RPSRRPPHRDCGTLPNRFVITPRRRYPIQQAQYSFLGVLPTVCWNGCHKKAVLSARNSKM
VCSPVTVRIAPPDSKLTRSPIPERLINSTLPSPSSNVPDPCAKETVLNALKERKKRIVEE
EDQIFVEGQENKRRRHDSSGSGHSAFEPLVANGVPASFVPKPGSLKRGLTSQSADDHLNK
RSRTSSVSSLTSTCTGGIPSSSRNAITSSYSSTRGISQLWKRSGPPASPFSSPASSRSQT
PERPAKKTREEEPGPHSSSPTPLVADKEFQGERVADTTTQKQQNSWASPATPGSSGQRKR
KVPLLPSRRGDQLTLPPPPQLGYSVTAEDLDLEKKASLQWFNKVLEDKADVPVNSVGESP
PATQPSFTFTLPAVGTTSSAASSPATGTNPLLESLKKMQSPPGPSLPEAAGVATTMAPSP
LKTPSLLAPLGSSPPGPLPGTSSDSKSTANFLGLVPASSPAPITDTKSPPALQADTPAKA
SGPPAPSPTPKQGLLFGGPSSVPSDPSPAAPAVSSASPMFKPIFATPPKSESEGPLPSSP
STAATAPSSSTLPTTTSAATPTFKPIFGDLGPPASVPLPAPFSFKPTTAATAAAAPAAPL
FAGLATATSAVATTTTSVPTDSASKPAFCFGVSNVASTGRSATGSVTPASQPFPFGAPPA
SATSFAPAVGSVFQFGKSTALPASTAAATFGQSLPGAVETATSSSSGGSSTAGFSGFGGS
LTTAAAAAATSSQPTLTFSSTTTPAFNIPFGSSTKPPLPAYPAANPQPTFGATDGQQQGS
SKPALAPGFGSSFTFGNSAAPAPSAAPAPAQPAFGSSAQSAFGLKTTASAFGAPANAQPA
FGGTTAVFSFGAATTSGFGATTQTTPSGTSGSVFGSTTPSPFTFGGSAAPASSGGFGLSV
AAPGPSSTSGAFSFGAGQSGTTGTTTPFGGGLSQNALGAPSQSTPFAFNVAGTPESKPVF
GGTSTPTFGQSTPTAGVGTVGSSLSFGASSTPTQGFVGVGPFGSTAPSFSIGAGSKTPGA
RQRLQARRQHTRKK
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgtctccggcggctgcggcggctggaggaggcgagcggcggcggccccctatagcgagc
gcccgggacggccggggccgggcccggggctgcggcgggccggcgggggcggcgctgctc
ggcctcgtgctgctcggcctcgtgctgtacctggtgcccgcggcggcggcgctggcctgg
ctggccgtgggggctaccgcggcctggtggggactgagccgcgagccccgaggcccgcgc
gccctgccgtcgttcgctcgcagcgcgcggaggcagcgaacgctgctcgcctcgccccca
gccaagtcggcagtaaacggcagcctcctagagcctcggaccctgctcgaaggacccgac
cccgccgaactgctcctcatgggcagctacctgggcaagcccggcccgccgcaggctgcc
accgccccggaaggcagggacccgcgggagcggcccggacgccgcccgcccgtccgctcc
ccgccgcccgcggcccagcgcgtcgcgcacgtttacccctctccccccacccctctcctc
cgaccctccaggaggcctccgcacagggattgtgggactttacccaatcgatttgtaata
acccctcgaagacgctatccaatccagcaggcccagtattccttcctgggggtgctaccc
acagtgtgctggaatggttgtcacaagaaggctgtgctctctgctcggaactccaaaatg
gtgtgtagcccagtgacagtgaggattgctcctccggatagcaagctaactcgttctcca
ataccagagcggttaatcaactcaacactgccctcaccatcaagtaatgttccagaccca
tgtgcaaaggagactgtactgaatgccctcaaagagaggaaaaaaaggattgtggaggaa
gaagaccaaatatttgtggaaggccaagagaataagagaaggcgccatgatagcagtggg
agtggacattcagcatttgagcccctggtggccaatggagtccctgcttcttttgtgcct
aagcctgggtctctgaagagaggtctcacttcccagagcgcagacgaccacttgaataag
cgatcacgcacctcttctgtgagctccctgacaagcacgtgcacaggtggcattcccagc
tccagccgcaatgcgattaccagttcctatagttctacccgaggcatctcacagctgtgg
aagaggagtggtcctcctgcatcccccttctctagcccagcttcctcccgctcccagacc
ccggagaggccagccaagaaaacaagagaagaggagccgggtccacattccagctccccg
actccactggtggccgacaaggagttccagggagagagggttgcagacacaaccacacag
aagcagcaaaactcgtgggcttccccagctacacctggcagctctggacagcggaaacgg
aaggtcccgctgctgccctccaggcgaggggaccagctgaccttgcctccaccacctcag
ctcggttattctgtcactgctgaggaccttgaccttgagaagaaagcttcactccaatgg
ttcaataaggtcttggaggacaaggctgatgttcctgtgaactccgtgggtgagagccca
cctgccactcagccctctttcacctttaccctgcctgcggtggggaccacttcctcagca
gcctcttccccagccacaggcaccaacccattgttagagagcctgaagaagatgcagagc
cccccaggcccatccctcccagaagctgccggagtggcaaccaccatggccccttcacct
ctgaagacacccagccttctggcccctctcggctcttcaccaccagggcccctgccaggc
acctcttcagattcaaaatccacagccaatttcttggggctggtccctgcttcctccccg
gcacccatcactgacaccaagtcacctccagcccttcaggccgacacacctgccaaagct
tcaggcccgcctgccccctccccgacccccaagcaaggcttgctgtttggcgggccgagc
agcgtgccctctgacccctccccggccgccccagccgtgtcttctgcttctcccatgttc
aagcccattttcgcgacaccacctaaaagcgagagcgaaggccccttgccatccagcccc
tccactgcagccacagctccttccagctccaccctccccacaaccaccagcgctgccacc
ccaacttttaaacccatctttggtgacctggggccacctgcgtctgtgcccttgcctgct
cccttttccttcaagccaacaactgctgcgactgctgctgcagccccagctgcccctctc
tttgctggcctggccactgccacctctgccgtggccaccaccaccaccagtgtgcccaca
gactctgcttctaagcctgctttttgcttcggggtcagcaacgtggctagcactgggcgc
agcgcgaccggaagtgtgacccctgcctcgcagcccttcccctttggggcgccccctgcc
tctgccaccagctttgccccagccgtgggctctgtgttccagtttggcaagtccactgcc
ttgccagcgtccacagcagctgctacctttggccagtccctgcctggtgctgttgagacg
gccaccagcagcagcagcggcggcagcagcactgctggcttcagtggctttggtggctcc
ctcaccaccgcagccgcagccgcagccaccagcagccagcccacactgactttcagcagc
acgaccacccctgcgttcaacattccctttggctcgagcaccaagcccccgctcccagca
tacccagcagccaacccccagcccacattcggggctactgatgggcagcagcaggggtcc
tccaagccagcccttgccccaggctttggcagctcattcacttttgggaactcagcggcc
cctgccccatctgcagcgccagcgccggcccagccagcctttggcagctcagcacagtcg
gcttttggcttgaagaccacggcctcggccttcggcgcccctgccaatgcgcagccagcc
tttggcggcaccacggctgtcttctcgtttggtgcagccaccacctctggcttcggagct
accacccagaccacccccagtgggaccagtggctcagtgtttggcagcacgactccatcc
cctttcaccttcgggggatctgcagccccagcttccagtgggggcttcgggctcagtgtg
gcagccccaggccccagctccacctccggggcattcagttttggagctggacagagtggg
accacaggcaccaccaccccctttggcgggggcttgagtcagaacgccctgggtgcaccc
agccagagcacaccctttgccttcaacgtggccggcacccctgagagcaagcctgtgttt
ggaggcacctccacacccacttttgggcagagcaccccaactgctggagtgggcacagtg
ggcagcagcctgtcctttggggcttcctcaacacccacccagggatttgttggagtcggg
cctttcggatcgacagccccttcattctccatcggtgcgggatccaagaccccaggggcc
cggcagcgactgcaggcccgaaggcagcacacccgcaagaagtag
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