Sciurus carolinensis (gray squirrel): 124979972
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Entry
124979972 CDS
T08117
Name
(RefSeq) keratin, type I cytoskeletal 27
KO
K07604
type I keratin, acidic
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04915
Estrogen signaling pathway
ncar05150
Staphylococcus aureus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04915 Estrogen signaling pathway
124979972
09160 Human Diseases
09171 Infectious disease: bacterial
05150 Staphylococcus aureus infection
124979972
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124979972
04147 Exosome [BR:
ncar04147
]
124979972
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124979972
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124979972
Exosomal proteins of other body fluids (saliva and urine)
124979972
Exosomal proteins of colorectal cancer cells
124979972
Exosomal proteins of melanoma cells
124979972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
TPR_MLP1_2
Bacillus_HBL
ATG16
UPF0242
ATG14
Motif
Other DBs
NCBI-GeneID:
124979972
NCBI-ProteinID:
XP_047400945
EnsemblRapid:
ENSSCRG00010003404
LinkDB
All DBs
Position
3:21787800..21792233
Genome browser
AA seq
461 aa
AA seq
DB search
MSVRFSSSSRRLGSCGGAGSVRLSGGEASFGAGNACGVPGIGSGFSCAFGGSSAAGGYGG
GLGGGSASCAAFTRNEHGLLSGNEKVTMQNLNDRLASYLENVRALEEANADLEQKIKGWY
EKFGPGSCRGLDHDYSRYFPIIDDLRNQIISATTSNANIVLQNDNARLTADDFRLKFENE
LALHQSVEADINGLRRVLDELTLCRTDLEVQLETLSEELAYLKKNHEEEMKALQCAAGGN
VNVEMNAAPGVDLTVLLNNMRAEYEALAEQNRRDAEAWFNEKSASLQQQISDDAGATTSA
RNELTELKRTLQTLEIELQSLLAMKQSLECSLTETEGNYCTQLAQIQAQIGALEEQLHQV
RTETEGQKLEYEQLLDIKAHLEKEIETYCRLIDGDDESCVKSKGYGGPGNQIKDSSKTAI
VKTVVEELDPRGKVLSSRVHTMEEKSTKVNNKSEREQRVPS
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtacgcttctcttcctcatccagacgcctgggctcttgtgggggcgcaggctct
gtgaggctctctgggggcgaagccagctttggggctggcaatgcatgcggtgtgccaggc
attggaagtggcttctcttgcgcctttgggggcagctccgcggcaggaggctatggtgga
gggctgggcgggggaagcgcttcttgtgctgccttcaccaggaacgaacacggcctcctc
tctggcaatgagaaggtgaccatgcagaacctcaacgaccgcttggcctcctacctggag
aatgttcgagcactagaggaggccaacgccgacttggagcagaagatcaaggggtggtat
gagaaatttggacctggttcttgccgaggtcttgatcatgattacagcagatacttcccg
ataatcgatgaccttagaaatcagataatttctgcaactacaagtaacgcaaatattgtc
ctgcaaaatgataatgcaagactaacagctgatgacttcagactgaagttcgagaacgaa
ctggcccttcaccagagcgtggaggcagacatcaatggcttgcgcagagtactggatgag
ctgaccttgtgcagaactgacctggaggtccagctggaaactctcagcgaggagctggca
tacctcaagaagaatcacgaggaggaaatgaaggctctgcagtgcgcggcgggaggcaac
gtgaacgtggagatgaacgccgcccccggggtggacctcacggtgctgctcaacaacatg
cgcgccgagtacgaggccctggctgagcagaaccggcgggacgccgaggcctggttcaac
gaaaagagcgcttcgctgcagcagcaaatttccgacgatgctggcgctaccacctccgct
aggaatgaactcacggaattgaaacgtactcttcaaaccctcgagattgaacttcagtcc
ctcttagcgatgaaacagtccctggagtgctccttgacggaaaccgagggcaactactgc
acgcagctggctcagatccaggctcagatcggggccctggaggagcagctgcaccaggtc
aggacggagaccgagggccagaaactggagtatgagcagctcctggacatcaaggcccac
ctggagaaggaaattgagacctactgccgcctgatagatggagatgatgaatcttgcgtt
aaatccaaaggttatggaggaccaggaaatcagataaaagattcatccaaaactgccatc
gtgaaaacagtcgttgaagaactagatcctcgtggcaaagttctctcatccagagttcac
accatggaagagaaatccaccaaagtcaacaacaaaagtgaacgtgaacagagggtgcct
tcctga
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