Sciurus carolinensis (gray squirrel): 124980410
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Entry
124980410 CDS
T08117
Name
(RefSeq) long-chain specific acyl-CoA dehydrogenase, mitochondrial
KO
K00255
long-chain-acyl-CoA dehydrogenase [EC:
1.3.8.8
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00071
Fatty acid degradation
ncar01100
Metabolic pathways
ncar01212
Fatty acid metabolism
ncar03320
PPAR signaling pathway
Module
ncar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09103 Lipid metabolism
00071 Fatty acid degradation
124980410
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
124980410
Enzymes [BR:
ncar01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.8 With a flavin as acceptor
1.3.8.8 long-chain acyl-CoA dehydrogenase
124980410
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Gene cluster
GFIT
Motif
Pfam:
Acyl-CoA_dh_1
Acyl-CoA_dh_N
Acyl-CoA_dh_M
Acyl-CoA_dh_2
Acyl-CoA_ox_N
Motif
Other DBs
NCBI-GeneID:
124980410
NCBI-ProteinID:
XP_047401887
EnsemblRapid:
ENSSCRG00010008891
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All DBs
Position
3:complement(156711404..156738774)
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AA seq
430 aa
AA seq
DB search
MASRLLLGSLRVLGRRCAPRPPPSARCSHSGGEERLESPSAKKLTDVGIRRIFSSEHDIF
RESVRKFFQDEVVPYHAEWEKAGEVTRELWEKAGKQGLLGVNIAEQHGGIGGDLFSTAIV
WEEQAYSNCTGPGFSLHSDIVMPYIANYGSKEQIEHFIPQMTAGKCIGAIAMTEPGAGSD
LQGVRTNAKKDGSDWILNGSKVFITNGWLSDVVIVVAVTNREARSPAHGISLFLVENGMK
GFIKGRKLHKMGLKAQDTAELFFEDVRLPASALLGEENKGFYYLMQELPQERLLIADLAI
SACEFMFEETRNYVKQRKAFGKTVAHIQTVQHKLAELKTHICVTRSFVDSCLKLHETKRL
DSASASMAKYWASDLQNSVAYACVQLHGGWGYMWEYPIAKAYVDARVQPIYGGTNEIMRE
LIARDIVSDK
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgcgcctcctcctcgggtccctgcgcgtcctgggccgccgctgcgcgccgcgc
ccgccgccctccgcgagatgttctcattctggaggggaagaacgtttggaatctccttct
gctaaaaaattaacagatgtaggaattagaagaatcttttcttcagagcacgacattttc
cgggaaagtgtaaggaagttttttcaagacgaagttgttccttatcatgctgagtgggag
aaagctggagaagtgaccagggaactctgggaaaaggctggaaaacaagggctgcttgga
gtcaatattgcagagcagcatggtggcattggtggcgacttgttctctacagctattgtg
tgggaggagcaagcatactcaaattgtacagggccaggttttagtcttcattcagatatt
gtcatgccttatattgccaactatggctcaaaagaacagattgagcacttcattccccag
atgacggcaggcaaatgtattggtgccatagcaatgacagagcctggggctggaagtgac
ttacagggagtaagaacaaatgccaagaaggatggaagtgattggattctcaatggaagc
aaggtgttcatcactaacgggtggttaagtgatgtcgtgattgtagtcgcggtcacaaat
cgtgaagctcgctcccccgcccatggcattagcctttttctggtagaaaatggaatgaaa
ggatttatcaaaggacggaagctacataaaatgggattaaaagctcaggatactgcagaa
ctattctttgaagatgtacgattgccagctagtgccttgcttggagaagagaataaaggc
ttctattacctcatgcaagaacttccacaggaaaggctgttaattgctgacttggcaatt
tcagcctgtgaattcatgtttgaagaaaccaggaactatgttaaacaaagaaaagctttt
ggaaaaacagttgcacacatacagacagtgcagcataaactagcagaattaaaaacacac
atatgtgtaaccagatcttttgtggatagctgtctgaagctgcatgaaacgaaacgactg
gactctgcctctgcttccatggcgaaatattgggcatctgacttacaaaacagtgttgct
tatgcatgtgttcagctccatggaggctggggatacatgtgggagtacccgattgcaaaa
gcttatgtggatgcccgtgttcagccaatctatggtggtaccaatgaaataatgagggag
ctgattgcaagagatatcgtcagtgacaagtag
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