Sciurus carolinensis (gray squirrel): 124982569
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Entry
124982569 CDS
T08117
Name
(RefSeq) keratin, type II cytoskeletal 5
KO
K07605
type II keratin, basic
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ncar04812
]
124982569
04147 Exosome [BR:
ncar04147
]
124982569
Cytoskeleton proteins [BR:
ncar04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
124982569
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124982569
Exosomal proteins of other body fluids (saliva and urine)
124982569
Exosomal proteins of colorectal cancer cells
124982569
Exosomal proteins of bladder cancer cells
124982569
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Keratin_2_head
TPR_MLP1_2
CENP-F_leu_zip
ATG16
AAA_13
DUF745
Alanine_zipper
COG6_N
DUF948
APG6_N
Baculo_PEP_C
Sec10_N
SlyX
Mce4_CUP1
Bap31_Bap29_C
CATRA-C
IFT20
Motif
Other DBs
NCBI-GeneID:
124982569
NCBI-ProteinID:
XP_047405385
EnsemblRapid:
ENSSCRG00010001072
LinkDB
All DBs
Position
4:complement(112621140..112626833)
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AA seq
594 aa
AA seq
DB search
MSRQSSVSFRSGGSRSFSAASAITPSVSRTSFTSVSRSGGGGGGRVSLGGVCGAGGYGSR
SLYNLGGSKRISFSASGGGFRNRFGGAGGGFGFGGGAGSGFGFGGGAGGGGGFGLGGAAG
FGGGYGGSGFPVCPPGGIQEVTVNQNLLTPLNLQIDPTIQRVRTEEREQIKTLNNKFASF
IDKVRFLEQQNKVLDTKWTLLQEQGTKTVRQSLEPLFEQYINNLRRQLDGILGERGRLDS
ELRNMQDLVEDFKNKYEDEINKRTTAENEFVMLKKDVDAAYMSKVELEAKVDALMDEINF
MKMFFDAELSQMQSHVSDTSVVLSMDNNRSLDLDSIIAEVKAQYEDIANRSRTEAESWYQ
TKYEELQQTAGRHGDDLRNTKHEISEMNRMIQRLRAEIDNVKKQCANLQNAIADAEQRGE
LALKDARNKLAELEEALQKAKQDMARLLREYQELMNTKLALDVEIATYRKLLEGEECRLS
GEGVGPVNISVVTNSVSSGYGGGSGFGGGSGFGGGLGGGLGGGLGSGLGGGSGGGYYSSS
SGGVGMGGGLSVGGSGFSASSGRGMGMGFGSGGSSSSSVKFVSTTSSSRRSFKS
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccagtcgagtgtgtccttccggagtgggggcagccgctccttcagtgctgct
tctgctatcaccccgtctgtctctcgcaccagtttcacctccgtgtcccggtcagggggt
ggcggtggtggcagggtcagccttgggggtgtttgtggagcaggtggctatggcagccgg
agcctgtacaatctgggtggctccaagaggatttccttcagcgctagcggtggaggcttc
aggaaccgatttggtggtgctggaggtggctttggctttggaggtggagccggcagcgga
tttggttttggcggtggagctggtggtggtggtggctttgggctcggtggtgcagctggc
tttggtggtggctatgggggctctggcttccccgtgtgcccccctggaggcatccaagag
gtcaccgtcaaccagaatctcctcacccctctgaacctgcaaattgaccccaccatccag
cgggtgaggactgaggagcgggagcagatcaagaccctcaacaacaagttcgcctccttc
atcgacaaggtgcggttcttggagcagcagaataaggtcttggacaccaagtggactctg
ctccaggagcagggcaccaagacagtgcgacagagcctggagcctttgtttgagcagtac
atcaacaacctcaggaggcagctggatgggatcctcggggagagaggccgcctggactca
gaactgaggaacatgcaggacctggtggaggatttcaagaacaagtatgaagatgaaatc
aacaagcgtaccaccgctgagaatgagtttgtgatgctgaagaaggatgtggacgctgcc
tatatgagcaaggtggagttagaggccaaggttgatgccctgatggatgagatcaacttc
atgaagatgttcttcgatgcggagctgtcccagatgcagtcacatgtctctgacacatcc
gtggtcctctccatggacaacaaccgcagcctggacctggacagcatcattgctgaggtc
aaggcccagtatgaggacatcgccaaccgcagccgaactgaagccgagtcctggtaccag
accaagtatgaagagctgcagcagaccgctggccggcatggggatgacctgcgcaacacc
aagcatgagatctctgagatgaaccgcatgatccagaggctgagagctgagatcgacaat
gtcaagaagcagtgcgccaacctgcagaacgccattgccgatgctgagcagcgtggggag
ctggccctcaaggatgcaaggaacaaactggcagagctggaggaggccctgcagaaggcc
aagcaggacatggcccggctgctgagggagtaccaggagctcatgaacaccaagttggcc
ctggacgtggagattgccacctaccgcaagctgctggagggcgaggagtgcaggctgagt
ggagagggtgttggaccagtcaatatctctgtcgtcacaaacagtgtctcctctggctat
ggcggtggcagcggctttggcggcggcagtggctttggtggaggcctcggtggaggcctc
ggcggaggcctcggcagtggtctcggtggaggcagcggcggtggctactactccagcagc
agtgggggtgttggtatgggcggtgggctcagtgtggggggctctggcttcagtgcaagc
agtggccgagggatgggaatgggctttggcagtggtgggagcagcagctccagcgtcaaa
tttgtctccaccacctcctcctcccggaggagcttcaagagctaa
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integrated database retrieval system
