Sciurus carolinensis (gray squirrel): 124983472
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Entry
124983472 CDS
T08117
Name
(RefSeq) RNA binding protein fox-1 homolog 2 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124983472
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124983472
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
124983472
NCBI-ProteinID:
XP_047406722
EnsemblRapid:
ENSSCRG00010001387
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All DBs
Position
4:complement(165365746..165633555)
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AA seq
464 aa
AA seq
DB search
MAEGAQPQQPPQLGPGAAARGMKRESELELPVPGAGGDGAEPGLSKRPRTEEAAADGGGM
QNEPLTPGYHGFPARDSQGNQEPTTTPDAMVQPFTTIPFPPPPQNGIPTEYGVPHTQDYA
GQTSEHNLTLYGSTQAHGEQSSNSPSTQNGSLTQTEGGAQTDGQQTQTQSSENSESKSTP
KRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKL
HGTVVEGRKIEVNNATARVMTNKKMVTPYANGWKLSPVVGAVYGPELYAASSFQADVSLG
NDAAVPLSGRGGINTYIPLISLPLVPGFPYPTAATTAAAFRGAHLRGRGRTVYGAVRAVP
PTAIPAYPGVVYQDGFYGADLYIESANCFRSNRVDMQPTDMHSLLLQPQPPLLQPLQPLT
ATVTAGYTQPTPTMPLPLPLAMELALWRVYTEVATADLPPTEVT
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaggcgcccagccgcagcagccgcctcagctcgggcccggcgccgctgcccgg
ggcatgaagcgggagtcggagctggagctgccggtgcccggagcgggaggagacggagcc
gagcccggcctgagcaagcggccgcgcaccgaggaggcggcggccgacggcggcgggatg
cagaacgagcctctaaccccaggttatcatggattcccagcgcgggacagccagggtaac
caggagccaacaacaactcctgacgcaatggtccagccttttactaccatcccgttccca
ccacctccacagaacggaattcccacagaatatggagtgccacacactcaggactatgcc
ggccagaccagtgagcataacctgacgctgtatggaagtacgcaagcccatggagaacag
agtagcaactcacctagcacacaaaacggatctctcacgcagacagaaggtggagcacag
acggacggccagcagacacagacacaaagtagtgaaaattcagagagtaaatctacccct
aagcgactgcatgtctccaatattcctttccgcttccgggaccctgacctccggcagatg
tttgggcagtttggcaaaatcctagatgtagaaataatctttaacgagcgtggctctaag
ggattcgggttcgtaactttcgagaatagtgctgatgcagacagggccagggagaaatta
cacggcaccgtggtagagggccgtaaaatcgaggtgaataatgctacagcacgtgtaatg
acaaataagaaaatggtcacaccgtatgcaaatggttggaaattaagcccagtagttgga
gctgtgtacggtcctgagttatatgcagcgtccagctttcaagcagatgtgtccctcggc
aatgatgcggcagtgcccctgtcaggaagagggggtatcaacacgtacattcctttgatc
agtctccctttagttcctggcttcccttacccaactgcagccaccacggcggccgctttc
cgaggagcccatctgaggggcagagggcggacggtatatggtgcagtccgagcggtacct
ccaacagccatccccgcctatccaggtgtggtttaccaggacggattttacggtgctgac
ctctatatagaatctgcaaactgcttcagatccaacagggtggatatgcagcctacagat
atgcacagcctgctactgcaaccgcagccaccgctgctgcagccgctgcagccgcttaca
gcgacggttacggcagggtatacacagccgacccctaccatgcccttgcccctgccgcta
gctatggagttggcgctgtggcgagtttataccgaggtggctacagccgatttgccccct
actgaagtgacgtga
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