KEGG   Sciurus carolinensis (gray squirrel): 124983880
Entry
124983880         CDS       T08117                                 
Name
(RefSeq) bile acid receptor isoform X1
  KO
K08537  farnesoid X receptor
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04976  Bile secretion
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    124983880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ncar03000]
    124983880
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:ncar03310]
    124983880
Transcription factors [BR:ncar03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    124983880
Nuclear receptors [BR:ncar03310]
 1. Thyroid hormone like
  1H. Liver X receptor like receptor
   124983880
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 124983880
NCBI-ProteinID: XP_047407485
EnsemblRapid: ENSSCRG00010004400
LinkDB
Position
4:156480823..156554590
AA seq 487 aa
MVMQFQGLENPIQTSPYHSHTSSEFVTEMMNVKPAKGVLTEQAAGALGQNLDVEPYSQYN
DVQFPQVQPQISSSSYYSSLGVYPQQPEEWYSPGLYELRRMPAETLYQGESEVAEMPVTK
KPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQYADQTLNEDSEG
RDLRQVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLI
LTEMATTHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPAGHAD
LLEERIRKSGISDDYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEK
LQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLC
EIWDVQC
NT seq 1464 nt   +upstreamnt  +downstreamnt
atggtaatgcagtttcaggggttagaaaatccaattcaaactagtccttaccacagccac
acatcgtcagaatttgtcacagaaatgatgaatgtgaagcctgctaaaggtgtgctaacg
gaacaagcggcaggtgctctggggcagaacctagatgtggagccatactctcagtacaac
gatgttcagtttccccaagttcaaccacagatttcctcctcatcctattattccagcctg
ggagtctacccccagcagcctgaagagtggtactctcccggattatatgaactcagacga
atgccagctgagactctgtaccagggagagagcgaggtggcagagatgcctgtaacaaag
aagccccgaatgggtgcatcagcagggaggattaaaggggacgagctgtgtgttgtttgt
ggagacagagcatctggataccattacaatgccctgacctgtgaggggtgcaaaggtttc
ttcaggagaagcattaccaaaaatgctgtgtacaagtgtaaaaatgggggcaactgtgtg
atggatatgtacatgcgaaggaagtgccaggagtgtcgactaaggaagtgcaaagagatg
ggaatgttggctgaatgtatgtatacaggcttgttaactgaaattcagtgtaaatctaaa
cgactgagaaaaaatgtgaagcagtatgcagatcagacccttaatgaggacagcgaagga
cgtgacttgcgacaagtgacctcaacgactaagtcatgcagggagaaaactgaactcacc
ccagatcaacagaatcttctacattatattatggattcatatagcaaacagaggatgcct
caggaaataacaaataaaattttaaaagaagaattcagtgcagaagaaaattttctcatt
ttaacagaaatggctaccactcatgtacagattcttgtagaattcacaaaaaagctgcca
ggatttcagactttggaccatgaagatcaaatcgctttgctaaaagggtctgcagttgaa
gctatgttcctccggtcagctgaaattttcaataaaaaactgccagctggacatgctgac
ctattggaagaaagaattcggaagagtggtatctctgatgactatataacacctatgttt
agtttttataaaagtattggggaattgaaaatgactcaagaagagtatgctctgcttaca
gcaattgttatcctctctccagatagacaatacataaaggacagagaggcagtggagaaa
cttcaggaaccactgctcgatgtgttacaaaaactgtgcaagattcatcagcctgaaaac
cctcagcattttgcctgtctcctgggtcgcctgactgaattgcggacattcaatcatcac
catgctgagatgctgatgtcatggagggtgaatgatcacaagttcaccccgctgctgtgt
gaaatctgggatgtgcagtgttga

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