Sciurus carolinensis (gray squirrel): 124983880
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Entry
124983880 CDS
T08117
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04976
Bile secretion
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09154 Digestive system
04976 Bile secretion
124983880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124983880
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ncar03310
]
124983880
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
124983880
Nuclear receptors [BR:
ncar03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
124983880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
124983880
NCBI-ProteinID:
XP_047407485
EnsemblRapid:
ENSSCRG00010004400
LinkDB
All DBs
Position
4:156480823..156554590
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AA seq
487 aa
AA seq
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MVMQFQGLENPIQTSPYHSHTSSEFVTEMMNVKPAKGVLTEQAAGALGQNLDVEPYSQYN
DVQFPQVQPQISSSSYYSSLGVYPQQPEEWYSPGLYELRRMPAETLYQGESEVAEMPVTK
KPRMGASAGRIKGDELCVVCGDRASGYHYNALTCEGCKGFFRRSITKNAVYKCKNGGNCV
MDMYMRRKCQECRLRKCKEMGMLAECMYTGLLTEIQCKSKRLRKNVKQYADQTLNEDSEG
RDLRQVTSTTKSCREKTELTPDQQNLLHYIMDSYSKQRMPQEITNKILKEEFSAEENFLI
LTEMATTHVQILVEFTKKLPGFQTLDHEDQIALLKGSAVEAMFLRSAEIFNKKLPAGHAD
LLEERIRKSGISDDYITPMFSFYKSIGELKMTQEEYALLTAIVILSPDRQYIKDREAVEK
LQEPLLDVLQKLCKIHQPENPQHFACLLGRLTELRTFNHHHAEMLMSWRVNDHKFTPLLC
EIWDVQC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggtaatgcagtttcaggggttagaaaatccaattcaaactagtccttaccacagccac
acatcgtcagaatttgtcacagaaatgatgaatgtgaagcctgctaaaggtgtgctaacg
gaacaagcggcaggtgctctggggcagaacctagatgtggagccatactctcagtacaac
gatgttcagtttccccaagttcaaccacagatttcctcctcatcctattattccagcctg
ggagtctacccccagcagcctgaagagtggtactctcccggattatatgaactcagacga
atgccagctgagactctgtaccagggagagagcgaggtggcagagatgcctgtaacaaag
aagccccgaatgggtgcatcagcagggaggattaaaggggacgagctgtgtgttgtttgt
ggagacagagcatctggataccattacaatgccctgacctgtgaggggtgcaaaggtttc
ttcaggagaagcattaccaaaaatgctgtgtacaagtgtaaaaatgggggcaactgtgtg
atggatatgtacatgcgaaggaagtgccaggagtgtcgactaaggaagtgcaaagagatg
ggaatgttggctgaatgtatgtatacaggcttgttaactgaaattcagtgtaaatctaaa
cgactgagaaaaaatgtgaagcagtatgcagatcagacccttaatgaggacagcgaagga
cgtgacttgcgacaagtgacctcaacgactaagtcatgcagggagaaaactgaactcacc
ccagatcaacagaatcttctacattatattatggattcatatagcaaacagaggatgcct
caggaaataacaaataaaattttaaaagaagaattcagtgcagaagaaaattttctcatt
ttaacagaaatggctaccactcatgtacagattcttgtagaattcacaaaaaagctgcca
ggatttcagactttggaccatgaagatcaaatcgctttgctaaaagggtctgcagttgaa
gctatgttcctccggtcagctgaaattttcaataaaaaactgccagctggacatgctgac
ctattggaagaaagaattcggaagagtggtatctctgatgactatataacacctatgttt
agtttttataaaagtattggggaattgaaaatgactcaagaagagtatgctctgcttaca
gcaattgttatcctctctccagatagacaatacataaaggacagagaggcagtggagaaa
cttcaggaaccactgctcgatgtgttacaaaaactgtgcaagattcatcagcctgaaaac
cctcagcattttgcctgtctcctgggtcgcctgactgaattgcggacattcaatcatcac
catgctgagatgctgatgtcatggagggtgaatgatcacaagttcaccccgctgctgtgt
gaaatctgggatgtgcagtgttga
DBGET
integrated database retrieval system