Sciurus carolinensis (gray squirrel): 124989436
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Entry
124989436 CDS
T08117
Name
(RefSeq) POM121-like protein 2
KO
K14316
nuclear pore complex protein Nup121
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03013
Nucleocytoplasmic transport
ncar05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124989436
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
124989436
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124989436
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124989436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
124989436
NCBI-ProteinID:
XP_047415234
LinkDB
All DBs
Position
7:130965072..130980753
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AA seq
776 aa
AA seq
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MGSFLGKPGPSASPASAPADSPERPRIRRPAPPLCHVQRVQYIHRAHPAPRRRPARRPPN
WDPAHPSRGVNEAWRRFPMNRFQNSVMGPLPSDWWESYLKRTIWSLRHPRAVWSPVTVKI
SPPGQRAPPSVSSAGVIASAGPSEVPPDPCAKETVLRALRQCRRGSARVREPPLPRSSDA
ERSREIRPSAFKPLAKQPASAYLVPRPGLLKRSFHSWSSGHSLRRSGCCSESCSAGRRTG
GPLCAKRNAISSSYSSSRDFTEPWRRSFPSTSIQTPEWPVKRKEKGHQYLSPVPLVSDSG
SPGAPDSGEQHRLKVPLLFSRPGNLLSTSSAPQLGCAGAGKALALGKEAGPQWGDKTREN
TALAWAGSPHSLPFTVPPPEAAATTSMHQLDILKMQKSPGPLAFPGSPGEATHVAQCSQK
TPSLPALAGCSHSEPPPETSTDAKPTATCILLTPASPTSPATDTAGLPSIPQADRSAMPL
DPPVVTLAAPTLQVATHNHESGARGSVFGSTAPRPFAFGGLVTPMDCGESGVLVSSPDSG
GRSFVSAGWGAWGMVFYFLGSGKLPLARVLRTERLKPREAAGEDPACSLCESLSNRLWPG
GVGSWREERKAQVSSFVSENHLLPDALSVQGLCRGDSSTRSCPPPALEHRVTPRGASSCP
QHSPDERGGTKAPRPELDGCRGGFLGTRARRLHRGGPLKAGGYWPQESSPTPRASRRCAL
LGSQLTLHRGCGEIWKVCRGRRADLLTSSPPSCLHHRRQEAGFGGVREDEIKSNTF
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcttcctgggcaagccgggtccctcggcgtccccagcctccgcgcccgccgat
tcgccagagaggcctcggatccgccggccggccccgccgctctgccacgtccagcgggtc
cagtacatccatcgcgcccaccctgccccacggcgcaggcccgcaaggaggccgccgaac
tgggaccctgcccatccttcgaggggtgtcaacgaggcatggaggcgctttcccatgaac
aggttccagaattccgtcatggggcctcttccctcagattggtgggaaagctacctcaag
cgcaccatttggtctcttcggcaccctcgggcggtgtggagcccggtgaccgtcaagatc
tctcctcctgggcagagagcgcccccgtccgtttcctcggcaggcgtgatcgcctccgca
ggaccctcggaggtgccgccagacccgtgcgcaaaggagacggtgctgagggcgctccgg
cagtgcaggagagggagcgccagggtgcgagaaccgccgctgccccggagctccgacgcg
gagaggagtcgcgagatcaggccatccgcctttaagccgctggcaaaacagccagccagc
gcttatcttgtccccaggcctgggcttctgaaaaggagcttccactcctggagctccggt
cacagcttgaggaggtcgggttgctgctctgagagctgctctgctggcagacgcacggga
ggccccctttgtgccaaaagaaatgccattagcagctcttatagttcttccagagatttc
acagagccgtggaggagaagttttcccagtacatcaatccagacaccagagtggccggtt
aaaaggaaagagaaaggtcaccagtatctctctccagtcccactggtgtcagactctggg
tccccgggagcacctgacagtggtgagcagcaccgtctgaaggttccactgctgttctct
cgccctggtaacctgctgtccaccagttcagctccccagctcggttgtgcaggcgctggc
aaggcccttgccttggggaaggaagctgggccccagtggggtgacaagaccagagagaat
acagccctggcgtgggctggcagtccacattccctgcctttcacggtgcctcctccagag
gcagcagctaccactagcatgcatcaactggacatcttgaagatgcagaagtctccaggt
ccactggccttcccagggtctcctggagaggcaacccatgtggcacagtgctctcagaag
acacccagcctgcctgccttagctggatgctcacactcagagccccctccagagacctct
acagacgcaaagcccaccgctacttgcatcctgctgaccccagcctctcccacatcacca
gccactgacaccgccggccttccttcaatccctcaggctgacaggtctgccatgcccctg
gaccctcctgtggttaccctagcagcacccaccttgcaagttgccactcacaaccacgag
agtggagcccggggctcagtgtttggcagcacagcgccacggccttttgcctttggggga
ttagtgacccctatggactgtggggagtccggggtccttgtgtccagtccagattctgga
ggaagatcctttgtatctgcaggctggggagcctgggggatggtgttttacttcctgggc
agtgggaagttgcctctggcgcgggtgcttaggacggagaggttgaaaccccgagaggcc
gcaggcgaagaccctgcctgcagtttgtgtgagtcactttcaaaccgcctgtggccaggc
ggggtcggctcttggagagaggagcgcaaggcccaggtttcctcgtttgtgtctgagaat
catcttctccctgacgccttgtcggtgcaaggtctttgcaggggtgacagttccacccgc
tcctgtcctccgccggccctggagcacagggtgactccgcgaggagcgagcagctgccct
cagcactcgcccgatgagaggggcgggacgaaagccccacgaccggagctggacggctgc
cgaggagggtttctcgggaccagggctcggcgcctccaccggggcggtccgctcaaggcc
ggtggctactggccgcaggagtccagccccacgccccgggcgtccaggcgctgtgccctg
ttgggctcgcagctcacgctccatcggggctgtggtgagatctggaaggtgtgcagaggc
cgccgggccgacctgttgacgagctctcctccctcgtgtcttcaccatcggcgacaggag
gctggtttcgggggtgttcgggaggacgaaataaaatcgaacacattttaa
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