Sciurus carolinensis (gray squirrel): 124989877
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Entry
124989877 CDS
T08117
Name
(RefSeq) hairy/enhancer-of-split related with YRPW motif protein 1 isoform X1
KO
K09091
hairy and enhancer of split related with YRPW motif
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04330
Notch signaling pathway
ncar05165
Human papillomavirus infection
ncar05200
Pathways in cancer
ncar05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124989877
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124989877
09162 Cancer: specific types
05224 Breast cancer
124989877
09172 Infectious disease: viral
05165 Human papillomavirus infection
124989877
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124989877
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
124989877
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
HTH_Crp_2
Motif
Other DBs
NCBI-GeneID:
124989877
NCBI-ProteinID:
XP_047415778
EnsemblRapid:
ENSSCRG00010002949
LinkDB
All DBs
Position
1:56207091..56211304
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AA seq
308 aa
AA seq
DB search
MKRAHPEYSSSDSELDETIEVEKESADENGNLSSALGSMSPTTSSQILARKRRRGIIEKR
RRDRINNSLSELRRLVPSAFEKQVMEKGSAKLEKAEILQMTVDHLKMLHTAGGKGYFDAH
ALAMDYRSLGFRECLAEVARYLSIIEGLDASDPLRVRLVSHLNNYASQREAASGAHAGLG
HIPWGSAFGHHPHIAHQLLLPQNSHGNAGTAASPTEPHHQGRLASAHPEVPALRAPPTGG
LGPVLPVVTSASKLSPPLLSSVASLSAFPFSFGSFHLLSPNALSPSAPTQAANLGKPYRP
WGTEIGAF
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgagctcaccccgagtacagctcctcggatagcgagctggacgagaccatagag
gtggaaaaggagagtgcggacgaaaatggaaacttgagttcggctctaggttccatgtcc
ccaactacatcttcccagatcttggccaggaaaagaaggagaggcatcattgagaagcgc
cgtcgagaccggatcaataacagtttgtctgagctaaggaggctggtacccagtgctttt
gagaagcaggtaatggagaaaggatctgctaagctagaaaaagctgagatcttacagatg
accgtggatcacctgaaaatgctgcacacggcaggggggaaaggttattttgatgcacac
gccctagctatggactatcggagtttggggtttcgggaatgcctggcagaagttgcccgt
tacctgagcatcattgaaggactagatgcctctgacccgcttcgcgttcgactggtctca
catctcaacaactacgcctcccagcgggaagctgcgagtggcgcccacgcgggccttgga
cacattccctgggggagcgccttcggacatcatccacacatcgcgcaccagctgttgctg
ccccagaacagccacggcaacgccggcaccgcagcatcgcccacggaaccacaccaccag
ggcaggttggcctcagcacatccggaggtgcctgctttgcgagcgccccctactggcggc
cttggaccggtactccccgtggtcacctctgcttccaaactctcaccgcctctgctgtcc
tcagtagcctcgctgtctgccttccccttctcctttggctccttccatttactctctccc
aatgcactgagcccttcggcacccacgcaggcggcaaaccttggtaaaccctatagacct
tgggggacggagatcggagctttttaa
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